Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_P14
         (501 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical pr...   154   4e-38
AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin...    28   4.4  
Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical
           protein JC8.3a protein.
          Length = 165

 Score =  154 bits (373), Expect = 4e-38
 Identities = 70/89 (78%), Positives = 81/89 (91%)
 Frame = +2

Query: 128 PRKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 307
           P KFDP EIKIV LRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT DWKGLK+T +
Sbjct: 2   PPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTCK 61

Query: 308 LTVQNRQAQIAVVPSAAALIIRALKEPPR 394
           LT+QNR A+I VVPSAA+LI++ LKEPPR
Sbjct: 62  LTIQNRVAKIDVVPSAASLIVKELKEPPR 90



 Score = 30.7 bits (66), Expect = 0.62
 Identities = 12/25 (48%), Positives = 21/25 (84%)
 Frame = +1

Query: 427 NGNISLEDVVGIAKIMRNRSMARYL 501
           NG+++++ ++ IA+IMR RSMA+ L
Sbjct: 101 NGDLTVDTIIKIARIMRPRSMAKKL 125


>AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin
           protein 73 protein.
          Length = 577

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 298 DLETLPVTCGLGNVITHLFRRQTKRTDFR 212
           D ++LP+ C LG V+ + ++     TDFR
Sbjct: 386 DSQSLPIWCKLGKVVKYKYKVTPGWTDFR 414


>Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical
           protein M01G12.6 protein.
          Length = 419

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 222 VLLVCLLKRWVMTL 263
           +L++CLLKRW M L
Sbjct: 180 ILMICLLKRWKMNL 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,479,417
Number of Sequences: 27780
Number of extensions: 229248
Number of successful extensions: 645
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)