Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_P11
         (492 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58729-3|AAM54204.1|  955|Caenorhabditis elegans Hypothetical pr...    27   7.4  
U58729-2|AAM54203.1|  913|Caenorhabditis elegans Hypothetical pr...    27   7.4  
U58729-1|AAM54202.1|  928|Caenorhabditis elegans Hypothetical pr...    27   7.4  
AF456360-1|AAL60231.1|  928|Caenorhabditis elegans immunoglobuli...    27   7.4  
Z46787-11|CAA86750.1|  610|Caenorhabditis elegans Hypothetical p...    27   9.8  

>U58729-3|AAM54204.1|  955|Caenorhabditis elegans Hypothetical
           protein F02G3.1c protein.
          Length = 955

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 196 CLALSACCLIPCLCPNACG 252
           C   + C LI C+C N CG
Sbjct: 908 CFITNKCGLISCICLNLCG 926


>U58729-2|AAM54203.1|  913|Caenorhabditis elegans Hypothetical
           protein F02G3.1b protein.
          Length = 913

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 196 CLALSACCLIPCLCPNACG 252
           C   + C LI C+C N CG
Sbjct: 881 CFITNKCGLISCICLNLCG 899


>U58729-1|AAM54202.1|  928|Caenorhabditis elegans Hypothetical
           protein F02G3.1a protein.
          Length = 928

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 196 CLALSACCLIPCLCPNACG 252
           C   + C LI C+C N CG
Sbjct: 881 CFITNKCGLISCICLNLCG 899


>AF456360-1|AAL60231.1|  928|Caenorhabditis elegans immunoglobulin
           domain-containingprotein F02G3.1 protein.
          Length = 928

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 196 CLALSACCLIPCLCPNACG 252
           C   + C LI C+C N CG
Sbjct: 881 CFITNKCGLISCICLNLCG 899


>Z46787-11|CAA86750.1|  610|Caenorhabditis elegans Hypothetical
           protein C16C10.12 protein.
          Length = 610

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -1

Query: 162 SRMKXQRPILLLFG-FITVMKYFKIN-NKTWHQFQPSRLISQYEENSVT 22
           SR     P+  + G  + V+ Y+ I  N TW Q   S LIS   E S T
Sbjct: 440 SRFLSYLPLFTIDGALMIVISYWMIGLNSTWQQVAKSILISVLVEQSAT 488


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,761,372
Number of Sequences: 27780
Number of extensions: 167584
Number of successful extensions: 464
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)