Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_P09
(482 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 244 6e-64
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 240 1e-62
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 200 1e-50
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 192 3e-48
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 190 1e-47
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 177 8e-44
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 168 7e-41
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 160 1e-38
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 159 4e-38
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 126 3e-28
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 123 2e-27
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 100 3e-20
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 99 5e-20
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 99 6e-20
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 94 2e-18
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 89 5e-17
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 87 2e-16
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 87 3e-16
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 81 1e-14
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 79 7e-14
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 78 9e-14
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 74 2e-12
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 71 1e-11
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 71 2e-11
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 65 7e-10
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 65 9e-10
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 52 9e-06
UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6; Bacteri... 50 4e-05
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 49 5e-05
UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa s... 49 6e-05
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 46 3e-04
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 44 0.002
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 44 0.002
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 43 0.003
UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14; Campyl... 42 0.006
UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3; Mycopla... 42 0.007
UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5; Proteob... 42 0.007
UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellula... 42 0.010
UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultu... 41 0.013
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 40 0.022
UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 40 0.039
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 40 0.039
UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11; Bacter... 40 0.039
UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5; Bacteri... 39 0.051
UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1; Thiomic... 39 0.068
UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 39 0.068
UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52; Bacter... 38 0.090
UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellula... 38 0.090
UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12; Bacter... 38 0.090
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 38 0.16
UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8; Ma... 38 0.16
UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 38 0.16
UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9; Bacteri... 38 0.16
UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1; Leptosp... 37 0.21
UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3; Bacteri... 37 0.27
UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4; Plancto... 36 0.48
UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9; Rickett... 36 0.48
UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17; ... 36 0.48
UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit... 36 0.63
UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of str... 36 0.63
UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22; Bacter... 36 0.63
UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellula... 36 0.63
UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16; Gammap... 35 0.84
UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast ... 35 0.84
UniRef50_A3TU64 Cluster: 30S ribosomal protein S17; n=3; Rhodoba... 35 1.1
UniRef50_Q233G5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2; Bacte... 35 1.1
UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase domain-conta... 35 1.1
UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2; Alphapr... 34 1.5
UniRef50_Q4P4F8 Cluster: Putative uncharacterized protein; n=1; ... 34 1.5
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 34 1.9
UniRef50_Q5LW49 Cluster: 30S ribosomal protein S17; n=22; Alphap... 34 1.9
UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19; Alphap... 34 1.9
UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983... 33 2.6
UniRef50_A5Z5U7 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_Q2JFG7 Cluster: 30S ribosomal protein S17; n=19; Bacter... 33 3.4
UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144; Bacte... 33 4.5
UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;... 32 5.9
UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1; ... 32 5.9
UniRef50_Q7U4J1 Cluster: 30S ribosomal protein S17; n=6; Synecho... 32 5.9
UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin CG... 32 7.8
UniRef50_Q9AIF7 Cluster: Ribosomal protein S17; n=2; Candidatus ... 32 7.8
UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofund... 32 7.8
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 244 bits (598), Expect = 6e-64
Identities = 117/140 (83%), Positives = 125/140 (89%)
Frame = +1
Query: 22 KMADQTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 201
K +TEKAFQKQ VFL K K K +R +K+VGLGFKTPREAIEGTYIDKKCPFTGN
Sbjct: 43 KTPRETEKAFQKQPHVFLASKVSSK-KPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGN 101
Query: 202 VSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 381
VSIRGRILTGVVQKMKMQ TIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDVEIGD+
Sbjct: 102 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVEIGDV 161
Query: 382 VTIGECRPLSKTVRFNVLKV 441
VT+GECRPLSKTVRFNVLKV
Sbjct: 162 VTVGECRPLSKTVRFNVLKV 181
Score = 62.5 bits (145), Expect = 5e-09
Identities = 30/47 (63%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = +1
Query: 25 MADQTEKAFQKQATVFLNRKGGM----KRKDMRHHKNVGLGFKTPRE 153
MADQTE++FQKQ T+FLNRK G+ K +R+ +NVGLGFKTPRE
Sbjct: 1 MADQTERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 240 bits (587), Expect = 1e-62
Identities = 115/145 (79%), Positives = 129/145 (88%), Gaps = 6/145 (4%)
Frame = +1
Query: 25 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 186
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 187 PFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 366
PFTGNVSIRGRIL+GVV KMKMQ TIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 367 EIGDIVTIGECRPLSKTVRFNVLKV 441
+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKV 145
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 200 bits (489), Expect = 1e-50
Identities = 92/136 (67%), Positives = 112/136 (82%)
Frame = +1
Query: 34 QTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 213
Q+E+AFQKQ +F N K ++ R +KN GLGFKTP+ AIEG+YIDKKCPFTG VSIR
Sbjct: 8 QSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIR 67
Query: 214 GRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 393
G+ILTG V KM TIVIRR YLHY+PKYNR+EKRH+N+ VH+SP FR V++GDIVT+G
Sbjct: 68 GKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR-VQVGDIVTVG 126
Query: 394 ECRPLSKTVRFNVLKV 441
+CRP+SKTVRFNV+KV
Sbjct: 127 QCRPISKTVRFNVVKV 142
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 192 bits (469), Expect = 3e-48
Identities = 89/136 (65%), Positives = 109/136 (80%)
Frame = +1
Query: 34 QTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 213
Q+E+AFQKQ +F N K G R R +K+VGLGFKTP EAI G Y+DKKCPF G VSIR
Sbjct: 8 QSERAFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIR 64
Query: 214 GRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 393
GRILTG V KM TI+IRR+YLH++PKYNR+EKRH+N++ H+SP FR + GD+VT+G
Sbjct: 65 GRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR-INEGDVVTVG 123
Query: 394 ECRPLSKTVRFNVLKV 441
+CRPLSKTVRFNVL+V
Sbjct: 124 QCRPLSKTVRFNVLRV 139
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 190 bits (463), Expect = 1e-47
Identities = 89/139 (64%), Positives = 108/139 (77%), Gaps = 3/139 (2%)
Frame = +1
Query: 34 QTEKAFQKQATVFLNRKGGMKRKD---MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 204
+ ++AFQKQ +F N K + +K +R+ K VGLGFK P++AIEG YIDKKCPFTGNV
Sbjct: 34 KNQRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNV 93
Query: 205 SIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 384
S+RG IL G+V KM TI+IRRDYLHY+ KYNR+EKRHRN+ VH+SP F V+ GDIV
Sbjct: 94 SVRGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKEGDIV 153
Query: 385 TIGECRPLSKTVRFNVLKV 441
G+CRPLSKTVRFNVLKV
Sbjct: 154 VCGQCRPLSKTVRFNVLKV 172
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 177 bits (432), Expect = 8e-44
Identities = 86/141 (60%), Positives = 107/141 (75%), Gaps = 5/141 (3%)
Frame = +1
Query: 34 QTEKAFQKQATVFLNRKG----GMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 201
QT +QKQ +F+ +K +K+ D R+ + VGLG+KTP+ A+EGT++D KCPFTGN
Sbjct: 6 QTGLFYQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGN 65
Query: 202 VSIRGRILTGVVQKM-KMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 378
VSIRGRIL GVV KM+ T+V+RR+YLHY+ KY R+EKRH N SVH SP DV+ GD
Sbjct: 66 VSIRGRILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSPAL-DVKEGD 124
Query: 379 IVTIGECRPLSKTVRFNVLKV 441
VT+GECRPLSKTVRFNVLKV
Sbjct: 125 TVTVGECRPLSKTVRFNVLKV 145
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 168 bits (408), Expect = 7e-41
Identities = 94/168 (55%), Positives = 111/168 (66%), Gaps = 29/168 (17%)
Frame = +1
Query: 25 MADQTEKAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCP 189
MA+QTEKAF KQ VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 190 FTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYN--------------------- 306
FTG VSIRGRI+ G KM TI++RR+YLH++ KY
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120
Query: 307 ---RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 441
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 121 LGCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 160 bits (389), Expect = 1e-38
Identities = 70/117 (59%), Positives = 89/117 (76%)
Frame = +1
Query: 91 MKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQITIVI 270
+ +K KN+G+G K P EAI Y DKKCPF G +SIRGRIL G V KM+ +++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 271 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 441
RRDYLH++ KY RFEKRH+N+ H SPCFR V+ GD+VTIG+CRPLSKT+RFNVL++
Sbjct: 76 RRDYLHWISKYKRFEKRHKNIPCHCSPCFR-VQEGDLVTIGQCRPLSKTIRFNVLRI 131
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 159 bits (385), Expect = 4e-38
Identities = 72/122 (59%), Positives = 94/122 (77%)
Frame = +1
Query: 76 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 255
+RK K +R+ K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM
Sbjct: 5 SRKHVNKSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMH 64
Query: 256 ITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 435
TI+IRR+YLH++ KY R++KRH++++VH SP F D + GD V IG+CRPLSKT+R+NVL
Sbjct: 65 RTIIIRRNYLHFIKKYQRYQKRHKSLAVHCSPAF-DPKQGDEVVIGQCRPLSKTIRYNVL 123
Query: 436 KV 441
+V
Sbjct: 124 EV 125
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 126 bits (304), Expect = 3e-28
Identities = 60/126 (47%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Frame = +1
Query: 43 KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI 222
K F +Q V + + R GFK P A YIDKKCPFTG+V++RGR+
Sbjct: 8 KVFPRQTGVCAKPYASHEEQPKRRVNAEVCGFKAPETAYTRQYIDKKCPFTGDVNVRGRL 67
Query: 223 LTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRD-VEIGDIVTIGEC 399
GVV+KMK + TIV+ +Y+HY KY R+ +RH N SVH+SPCF + +GD V GE
Sbjct: 68 FKGVVKKMKAEKTIVVVANYVHYSKKYKRYSRRHTNFSVHMSPCFEGMINVGDTVICGET 127
Query: 400 RPLSKT 417
RPLSKT
Sbjct: 128 RPLSKT 133
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 123 bits (296), Expect = 2e-27
Identities = 56/90 (62%), Positives = 71/90 (78%)
Frame = +1
Query: 172 IDKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 351
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLSN 82
Query: 352 CFRDVEIGDIVTIGECRPLSKTVRFNVLKV 441
++GDIV I ECRP+SKTVRFNV+KV
Sbjct: 83 LL-TCKVGDIVIIAECRPISKTVRFNVIKV 111
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 99.5 bits (237), Expect = 3e-20
Identities = 50/113 (44%), Positives = 67/113 (59%)
Frame = +1
Query: 103 DMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDY 282
+ R K++GLG K PR + D CPF GN+ +RG IL GVV +M T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Query: 283 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 441
Y KY R+E+R + H PC D + GD V I ECRPLSKT F V++V
Sbjct: 60 YRYDRKYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKTKSFVVIEV 111
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 99.1 bits (236), Expect = 5e-20
Identities = 40/88 (45%), Positives = 62/88 (70%)
Frame = +1
Query: 175 DKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 354
D+ CPF G++ +RG+I+ G + K+ MQ +I++ R+++ Y+ K+ R+EKR R + HL C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
Query: 355 FRDVEIGDIVTIGECRPLSKTVRFNVLK 438
DV +GD V I ECRPLSKT+ F V++
Sbjct: 79 IGDVNVGDSVRIMECRPLSKTITFCVIE 106
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 98.7 bits (235), Expect = 6e-20
Identities = 44/73 (60%), Positives = 55/73 (75%)
Frame = +1
Query: 76 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 255
N +G K R KN+GLGFKTPREAI+G Y+DKKCPFTG VSIRGRIL + + +MQ
Sbjct: 31 NLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCEMQ 90
Query: 256 ITIVIRRDYLHYL 294
TI++ RDYLH++
Sbjct: 91 STIIVARDYLHFV 103
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 93.9 bits (223), Expect = 2e-18
Identities = 46/107 (42%), Positives = 62/107 (57%)
Frame = +1
Query: 118 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLP 297
+++GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 298 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 438
KY R+EKR + H C ++GDIVTI ECRP+SKT F V+K
Sbjct: 59 KYQRYEKRRSKIHAHNPACI-SAKVGDIVTIVECRPISKTKSFVVVK 104
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 89.0 bits (211), Expect = 5e-17
Identities = 44/98 (44%), Positives = 59/98 (60%)
Frame = +1
Query: 124 VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKY 303
+GL + P E T D+ CPF G +S+RG+ L G V M+ T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 304 NRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 417
+RF KR + H C D+ +GD VTI ECRPLSKT
Sbjct: 59 DRFMKRRSRVPAHAPDCL-DLAVGDTVTIAECRPLSKT 95
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 87.0 bits (206), Expect = 2e-16
Identities = 40/89 (44%), Positives = 58/89 (65%)
Frame = +1
Query: 175 DKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 354
D CP+ G + +RG +L GVV K + + +V++ YL+Y KYNR+E+R + + HL C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
Query: 355 FRDVEIGDIVTIGECRPLSKTVRFNVLKV 441
V+ GD+V IGE P+SKTV+F VL V
Sbjct: 84 I-SVKEGDVVVIGETMPISKTVKFTVLGV 111
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 86.6 bits (205), Expect = 3e-16
Identities = 44/106 (41%), Positives = 67/106 (63%)
Frame = +1
Query: 118 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLP 297
+++G+ + P +A+ D KCP+ G+V +RG IL G V + M +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMG-QVVIQHEWLHYSP 87
Query: 298 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 435
KY R+ ++ RN+ HL C + V +GD V IGE RPL+K + F VL
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIK-VNVGDYVVIGETRPLAKFISFVVL 132
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 81.0 bits (191), Expect = 1e-14
Identities = 39/107 (36%), Positives = 61/107 (57%)
Frame = +1
Query: 118 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLP 297
+N+GL K P E D CP+ G +S+RG++LTG V M + V+ R+Y Y+P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Query: 298 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 438
KY R + + VH+ C + ++ GD V ECR L+KT+ F +++
Sbjct: 60 KYERKATKIKKYHVHVPDCIK-IKPGDTVRFAECRKLAKTISFVIVE 105
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 78.6 bits (185), Expect = 7e-14
Identities = 39/106 (36%), Positives = 65/106 (61%)
Frame = +1
Query: 118 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLP 297
KN+G+ P ++ D CP+ G++ +R ++L V+K++M V+ ++LHY+
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 60
Query: 298 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 435
KYNR+E+R + M V + C +V+ GD V I E RPLSKT+ + V+
Sbjct: 61 KYNRYERRRKRMRVRVPECI-EVKPGDKVIIAETRPLSKTIAWVVI 105
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 78.2 bits (184), Expect = 9e-14
Identities = 38/87 (43%), Positives = 51/87 (58%)
Frame = +1
Query: 175 DKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 354
DKKCP G++ +RG G V K T+ I ++LPKY R+E R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 355 FRDVEIGDIVTIGECRPLSKTVRFNVL 435
+D++ GD V IGE RPLSKT F VL
Sbjct: 76 LKDIKEGDYVLIGETRPLSKTKHFVVL 102
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 73.7 bits (173), Expect = 2e-12
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +1
Query: 118 KNVGL-GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYL 294
+++G+ G K P E D +CPF G +S+RG+IL G+V KM IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 295 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 438
KY R ++ + + PC + +IGDI+TI ECRPL+K F V++
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCM-EAKIGDIITIAECRPLNKGSSFVVIE 104
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 70.9 bits (166), Expect = 1e-11
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +1
Query: 175 DKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 354
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+E R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
Query: 355 FRDVEIGDIVTIGECRPLSKTVRFNVL 435
V+ GD V + E RPL+K+V F V+
Sbjct: 81 I-PVKPGDEVIVAETRPLAKSVSFVVI 106
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 70.5 bits (165), Expect = 2e-11
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Frame = +1
Query: 118 KNVGLGFKTP-REAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYL 294
+ +GL P REA +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 295 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 441
K+ R+ + + H+ P DV GD V ECRP++K+V F V++V
Sbjct: 60 TKFKRYARGRSRIHAHV-PSNIDVREGDRVLAAECRPVAKSVSFVVVEV 107
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 65.3 bits (152), Expect = 7e-10
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +1
Query: 328 NMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 441
NMS+H S CFRDV IG IVT+GEC+PLSKTVRF + KV
Sbjct: 34 NMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRFIMFKV 71
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 64.9 bits (151), Expect = 9e-10
Identities = 39/102 (38%), Positives = 55/102 (53%)
Frame = -3
Query: 441 NFQNIESNCFGQRSAFADRYNITNLHVPEARRQMHGHIPVPFLEPIVFG*VVKVIAADHD 262
NFQNIES+ F S + NIT + E+ R + +I V F ++F V++VI++D+D
Sbjct: 61 NFQNIESDSFRNWSTLTNGDNITFFN-SESWRDVGSNILVSFFVSVIFWNVMQVISSDND 119
Query: 261 SYLHLHLLNDAGEDAAADRNVASEGTLLVNVGTLNRLSGSFE 136
+H N G+D +D N SE T VNV T N FE
Sbjct: 120 GTVHFGGNNSTGQDFTSDGNSTSEWTFFVNVRTFNGSFWGFE 161
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 51.6 bits (118), Expect = 9e-06
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +1
Query: 223 LTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 402
LTG+V KM T+V+ + L P Y ++ KR + H + +IGD+V I E R
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDER--NECKIGDVVEIEETR 63
Query: 403 PLSKTVRFNVLKV 441
PLSKT R+ V+++
Sbjct: 64 PLSKTKRWRVVRI 76
>UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6;
Bacteria|Rep: 30S ribosomal protein S17 - Thermus
thermophilus
Length = 105
Score = 49.6 bits (113), Expect = 4e-05
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 217 RILTGVVQKMKMQ--ITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 390
++LTGVV KMQ +T+++ R + H P Y + KR + H P ++GD+V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPH--PLYGKVIKRSKKYLAH-DP-EEKYKLGDVVEI 59
Query: 391 GECRPLSKTVRFNVLKV 441
E RP+SK RF VL++
Sbjct: 60 IESRPISKRKRFRVLRL 76
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 49.2 bits (112), Expect = 5e-05
Identities = 32/74 (43%), Positives = 40/74 (54%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
+I+TG V M TI + D L PKY++F ++ R H + EIGDIV I E
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAHDEN--NECEIGDIVEIEE 61
Query: 397 CRPLSKTVRFNVLK 438
R LSKT F VLK
Sbjct: 62 SRKLSKTKAF-VLK 74
>UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa sp.
PS|Rep: Ribosomal protein S17 - Beggiatoa sp. PS
Length = 100
Score = 48.8 bits (111), Expect = 6e-05
Identities = 28/70 (40%), Positives = 38/70 (54%)
Frame = +1
Query: 208 IRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 387
IR I V KM IT+++ R H PKY ++ KR + VH ++GDIV
Sbjct: 20 IRTLIGQVVSDKMHKTITVLVSRKIKH--PKYGKYIKRSTKLHVHDEE--NTCQVGDIVA 75
Query: 388 IGECRPLSKT 417
I +CRP+SKT
Sbjct: 76 ISQCRPISKT 85
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 46.4 bits (105), Expect = 3e-04
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +1
Query: 208 IRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 387
I+G+++T K +TI++ R H PKY + KR + VH V++GD++
Sbjct: 11 IQGKVVTKAGDK---SVTILVERRVTH--PKYRKIVKRFKKYIVHDES--NAVKVGDMIE 63
Query: 388 IGECRPLSKTVRFNVLKV 441
ECRPLSK F++ KV
Sbjct: 64 AIECRPLSKRKSFSLHKV 81
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +1
Query: 220 ILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 399
+L G+V + KMQ +IV+ + + Y +F R + VH + +V GDIV I EC
Sbjct: 7 VLQGIVIRSKMQKSIVVSINRIVKHSMYKKFINRTTKIYVHDTNNISNV--GDIVEITEC 64
Query: 400 RPLSKT 417
RP+SKT
Sbjct: 65 RPISKT 70
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 43.6 bits (98), Expect = 0.002
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = +1
Query: 205 SIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 384
+I+ R + G V KM TIV+ + L Y ++ KR + +SVH S EIGDIV
Sbjct: 4 NIKVRKIKGKVVSNKMNKTIVVLIERLFKHKTYGKYIKRSKKLSVHDSK--NKAEIGDIV 61
Query: 385 TIGECRPLSKTVRFNVLKV 441
E +SKT + ++K+
Sbjct: 62 ECAESLKISKTKSWILIKI 80
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 43.2 bits (97), Expect = 0.003
Identities = 27/73 (36%), Positives = 38/73 (52%)
Frame = +1
Query: 223 LTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 402
L GVV KM T+V++ D P Y + + + H + +GDIV I E R
Sbjct: 17 LVGVVVSDKMDKTVVVKVDRKVPHPIYGKHIIKSKKYHAHDE--HNECRVGDIVMIRETR 74
Query: 403 PLSKTVRFNVLKV 441
PLSKT R+ V+K+
Sbjct: 75 PLSKTKRWVVVKI 87
>UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14;
Campylobacterales|Rep: 30S ribosomal protein S17 -
Campylobacter jejuni
Length = 83
Score = 42.3 bits (95), Expect = 0.006
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 217 RILTGVVQKMKMQIT--IVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 390
R + GVV K+ + T +++ R +H P+Y + KR + +H +V++GD V
Sbjct: 5 REIQGVVVKIAGEKTASVLVERKVVH--PRYRKIVKRFKKYLIHDER--NEVKVGDTVVA 60
Query: 391 GECRPLSKTVRFNVLKV 441
ECRPLSK F + V
Sbjct: 61 VECRPLSKRKSFRLKSV 77
>UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3;
Mycoplasma|Rep: 30S ribosomal protein S17 - Mycoplasma
mobile
Length = 92
Score = 41.9 bits (94), Expect = 0.007
Identities = 28/77 (36%), Positives = 38/77 (49%)
Frame = +1
Query: 211 RGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 390
R + LTGVV K TIV+ D P Y + K + + H + ++GDIV I
Sbjct: 7 RRKALTGVVVSDKSSKTIVVAVDTFKKDPLYQKRFKSTKKFAAHDEK--EEAQMGDIVKI 64
Query: 391 GECRPLSKTVRFNVLKV 441
RPLSKT F + K+
Sbjct: 65 VGTRPLSKTKFFRLEKI 81
>UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5;
Proteobacteria|Rep: 30S ribosomal protein S17 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 90
Score = 41.9 bits (94), Expect = 0.007
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
R+LTG V KM T+ + D P Y +F +R + + H + GD+V I E
Sbjct: 4 RVLTGRVTSDKMDKTVTVLLDRRIMHPLYKKFIRRSKKYAAHDEE--NVCQTGDLVRIEE 61
Query: 397 CRPLSKTVRFNVL 435
C P+SK ++V+
Sbjct: 62 CAPISKRKTWSVV 74
>UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 -
Dehalococcoides sp. (strain CBDB1)
Length = 90
Score = 41.5 bits (93), Expect = 0.010
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +1
Query: 202 VSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 381
+ I+ + G V KM+ TIV+ D + P Y + +R VH + +IGD+
Sbjct: 1 MEIKNKTRIGHVISDKMEKTIVVGIDVVKRHPLYKKTYRRTMKYLVHDEK--NEAKIGDM 58
Query: 382 VTIGECRPLSKTVRFNVLKV 441
+ I ECRP+SK + + K+
Sbjct: 59 IEIVECRPISKGKYWRLSKI 78
>UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultured
bacterium 562|Rep: 30S ribosomal protein S17 -
uncultured bacterium 562
Length = 95
Score = 41.1 bits (92), Expect = 0.013
Identities = 29/73 (39%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 205 SIRGRILTGVV--QKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 378
S RIL+GVV K IT+ I R H P Y + KR + H IGD
Sbjct: 3 STNPRILSGVVISDKADKTITVKIERKVKH--PLYGKVMKRATKVHAHDEN--NSAAIGD 58
Query: 379 IVTIGECRPLSKT 417
VT+ ECRP SK+
Sbjct: 59 QVTVKECRPFSKS 71
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 40.3 bits (90), Expect = 0.022
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 217 RILTGVVQKMKMQ--ITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 390
R L G V KMQ +T+++ R H L Y + R H+ GD+V I
Sbjct: 10 RALVGRVVSDKMQNTVTVLVERRVKHEL--YGKVITRSAKYHAHVED--GGAAAGDLVEI 65
Query: 391 GECRPLSKTVRFNVLKV 441
ECRP+SKT + V KV
Sbjct: 66 EECRPISKTKSWRVAKV 82
>UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 -
Symbiobacterium thermophilum
Length = 94
Score = 39.5 bits (88), Expect = 0.039
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1
Query: 229 GVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 408
GVV KM T+V+ + L P Y + +R + H ++GD V I E RPL
Sbjct: 13 GVVTSDKMDKTVVVAVETLVQHPLYKKRVRRTKKFKAHDE--HNQCKVGDKVRIMETRPL 70
Query: 409 SKTVRFNVLKV 441
SK R+ V+++
Sbjct: 71 SKEKRWRVVEI 81
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 39.5 bits (88), Expect = 0.039
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +1
Query: 232 VVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLS 411
V++ I + + Y H L RF+KR + + H E+GD V I ECRP+S
Sbjct: 26 VIRTSPKTIMVEVETAYKHKLYA-KRFKKR-KKFNTHDEKNL--AEVGDFVKIAECRPIS 81
Query: 412 KTVRFNVLKV 441
KT F +++V
Sbjct: 82 KTKHFRLVEV 91
>UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11;
Bacteria|Rep: 30S ribosomal protein S17 - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 86
Score = 39.5 bits (88), Expect = 0.039
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
++ GVV KM+ T+V+R + + P+Y + + + H V GD V I E
Sbjct: 10 KVKIGVVVSAKMEKTVVVRVERIFSHPQYLKVVRSSKKYYAHTE---LKVSEGDKVKIQE 66
Query: 397 CRPLSKTVRFNVLK 438
RPLSK R+ V++
Sbjct: 67 TRPLSKLKRWRVIE 80
>UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5;
Bacteria|Rep: 30S ribosomal protein S17 - Acidobacteria
bacterium (strain Ellin345)
Length = 101
Score = 39.1 bits (87), Expect = 0.051
Identities = 26/73 (35%), Positives = 35/73 (47%)
Frame = +1
Query: 223 LTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 402
L G+V KMQ TIV++ + Y R R + H + IGD V I E R
Sbjct: 16 LIGLVVSTKMQKTIVVQVERQKSHAMYGRVISRRKRFYAHDEE--QTAHIGDYVRIEETR 73
Query: 403 PLSKTVRFNVLKV 441
PLSK R+ + +V
Sbjct: 74 PLSKLKRWKLAEV 86
>UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1;
Thiomicrospira crunogena XCL-2|Rep: 30S ribosomal
protein S17 - Thiomicrospira crunogena (strain XCL-2)
Length = 87
Score = 38.7 bits (86), Expect = 0.068
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +1
Query: 211 RGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 390
+ R + GVV M ++V+ + PKY +F ++ + H + +GD VTI
Sbjct: 7 KARTMQGVVVSNGMDKSVVVMTNRYIKHPKYKKFVRKSTKVMAHDAD--NACGVGDRVTI 64
Query: 391 GECRPLSKTVRFNVLKV 441
EC P SK ++++ +
Sbjct: 65 SECTPFSKRKTWSLVSI 81
>UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 78
Score = 38.7 bits (86), Expect = 0.068
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
RIL G V K T+V+R + P + +R + H ++GD+V+I E
Sbjct: 4 RILQGTVVSDKNDKTVVVRVERRFAHPILQKTVRRSKKYKAHDEN--NQFKVGDLVSIEE 61
Query: 397 CRPLSKTVRFNVL 435
C P+SK R+ V+
Sbjct: 62 CAPISKDKRWTVV 74
>UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52;
Bacteria|Rep: 30S ribosomal protein S17 - Xylella
fastidiosa
Length = 89
Score = 38.3 bits (85), Expect = 0.090
Identities = 22/79 (27%), Positives = 44/79 (55%)
Frame = +1
Query: 205 SIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 384
+I+GR+++ KM+ +T+++ R H L Y ++ KR + H + + GD+V
Sbjct: 13 TIKGRVISN---KMQKTVTVLVERQIKHAL--YGKYIKRSTKLHAHDADDLCNE--GDVV 65
Query: 385 TIGECRPLSKTVRFNVLKV 441
+ E P+SKT + V+++
Sbjct: 66 LMTEVAPISKTKNWRVVEI 84
>UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellular
organisms|Rep: 30S ribosomal protein S17 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 84
Score = 38.3 bits (85), Expect = 0.090
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +1
Query: 229 GVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 408
GVV KM TI + + P Y +F + + H + IGD V I E RPL
Sbjct: 11 GVVSSNKMDKTITVAVKWKEKHPIYGKFVNKTKKYHAHDEK--NECGIGDTVRIMETRPL 68
Query: 409 SKTVRFNVLKV 441
S+T R+ + ++
Sbjct: 69 SRTKRWRLTEI 79
>UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12;
Bacteria|Rep: 30S ribosomal protein S17 - Bdellovibrio
bacteriovorus
Length = 89
Score = 38.3 bits (85), Expect = 0.090
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = +1
Query: 232 VVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLS 411
+ KM I+++I R H KY ++ K+ H +IGDIV I E RPLS
Sbjct: 18 ISDKMDKTISVLIYRMVKH--AKYGKYVKKTSVFKAHDEK--NQAKIGDIVKIRETRPLS 73
Query: 412 KTVRFNVLKV 441
KT R+ + +V
Sbjct: 74 KTKRWALAEV 83
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 37.5 bits (83), Expect = 0.16
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 214 GRILTG-VVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 390
GR L G V+Q KM T+ ++ DY ++ PK F+ + VH S F GD V I
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENF--CVTGDKVVI 81
Query: 391 GECRPLSKTVRFNVLKV 441
P+S + V +
Sbjct: 82 KSMLPISTMKHYYVRNI 98
>UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8;
Magnoliophyta|Rep: 40S ribosomal protein S17-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 105
Score = 37.5 bits (83), Expect = 0.16
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
+ + G V KMQ+++V+ D L + YNR+ KR H IGD V +
Sbjct: 2 KAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEK--DSCNIGDRVKLDP 59
Query: 397 CRPLSK 414
RPLSK
Sbjct: 60 SRPLSK 65
>UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 - Mycoplasma
pneumoniae
Length = 85
Score = 37.5 bits (83), Expect = 0.16
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
++L G+V+ K T ++ + P Y++ RH+ H + GD V I E
Sbjct: 7 KVLIGIVKSTKNAKTATVQVESRFKHPLYHKSVVRHKKYQAHNEGEVL-AKDGDKVQIVE 65
Query: 397 CRPLSKTVRFNVLKV 441
RPLS T RF + K+
Sbjct: 66 TRPLSATKRFRIAKI 80
>UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9;
Bacteria|Rep: 30S ribosomal protein S17 -
Corynebacterium efficiens
Length = 92
Score = 37.5 bits (83), Expect = 0.16
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
++ TG V KMQ TIV+ + Y++ + ++ + H IGD+V I E
Sbjct: 15 KVRTGYVVSDKMQKTIVVELEDRKQHALYSKILRTNKKVKAHDEENIAG--IGDLVRIEE 72
Query: 397 CRPLSKTVRFNVLKV 441
RPLSK + ++++
Sbjct: 73 TRPLSKDKNYRLIEI 87
>UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1;
Leptospirillum sp. Group II UBA|Rep: 30S ribosomal
protein S17 - Leptospirillum sp. Group II UBA
Length = 95
Score = 37.1 bits (82), Expect = 0.21
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 229 GVVQKMKMQITIV--IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 402
GVV KM T+V I+R LH P Y++ R + H +E+G +V I R
Sbjct: 20 GVVVGNKMMKTVVVEIQRRVLH--PLYHKVVSRRTRIKAHTQ---EPIEVGSVVEIISTR 74
Query: 403 PLSKTVRFNVLKV 441
P+SK VL+V
Sbjct: 75 PISKDKSHRVLRV 87
>UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3;
Bacteria|Rep: 30S ribosomal protein S17 - Solibacter
usitatus (strain Ellin6076)
Length = 102
Score = 36.7 bits (81), Expect = 0.27
Identities = 24/71 (33%), Positives = 32/71 (45%)
Frame = +1
Query: 229 GVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 408
G V KMQ TIV+ P Y R + + H +GD+V I ECRPL
Sbjct: 16 GEVVSTKMQKTIVVEVSRRVPHPLYKRIIGKRKKFYAHDEE--GRANLGDVVRIIECRPL 73
Query: 409 SKTVRFNVLKV 441
SK R+ + +
Sbjct: 74 SKLKRWRLADI 84
>UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4;
Planctomycetaceae|Rep: 30S ribosomal protein S17 -
Rhodopirellula baltica
Length = 117
Score = 35.9 bits (79), Expect = 0.48
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
R++ G+V KM T + L PKY ++ +R VH + +GD V I E
Sbjct: 4 RVVAGIVTSDKMSKTRRVEIARLVKHPKYKKYIRRRTVCHVHDEN--NESGVGDKVEIIE 61
Query: 397 CRPLSKTVRFNVLKV 441
PLSK R+ +++V
Sbjct: 62 SEPLSKLKRWRLVRV 76
>UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9;
Rickettsiales|Rep: 30S ribosomal protein S17 - Ehrlichia
canis (strain Jake)
Length = 83
Score = 35.9 bits (79), Expect = 0.48
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
++LTGVV K TI + + Y + K+ +N VH + + GD+V I E
Sbjct: 13 KVLTGVVVATKCDKTIKVMVSRMVRHKTYKKIVKKRKNYVVHDE--YNKCKCGDVVKIQE 70
Query: 397 CRPLSKTVRFNVL 435
P+S T R+ V+
Sbjct: 71 HIPISATKRWIVI 83
>UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17;
n=23; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S17 - Guillardia theta (Cryptomonas phi)
Length = 90
Score = 35.9 bits (79), Expect = 0.48
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +1
Query: 202 VSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 381
+SI+ R+ + KM + + I H +Y + + + VH P + ++GD+
Sbjct: 1 MSIKERLGLVISDKMDKTVVVSIANRVTH--KRYGKIVTKTKKYKVH-DPN-NNCQVGDL 56
Query: 382 VTIGECRPLSKTVRF 426
+ I E RPLSKT R+
Sbjct: 57 ILINETRPLSKTKRW 71
>UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit
S17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S17 - Schizosaccharomyces
pombe (Fission yeast)
Length = 90
Score = 35.5 bits (78), Expect = 0.63
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +1
Query: 229 GVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 408
G+V M T +R + P ++ +++N V + +GD VTI CRP
Sbjct: 7 GIVISRAMPKTAKVRVAKEKFHPVVKKYVTQYQNYMVQDD---LNCNVGDAVTIQPCRPR 63
Query: 409 SKTVRFNVLKV 441
S T RF ++K+
Sbjct: 64 SATKRFEIIKI 74
>UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 232
Score = 35.5 bits (78), Expect = 0.63
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +1
Query: 211 RGR-ILTGVVQKM--KMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 381
RGR GVV ++ K +I +R Y+P + HR+ H + GD+
Sbjct: 9 RGRQSFVGVVTRLGPKGSKSIKVRVTRRKYMPAILKEINFHRDFYTHDE--MMACQEGDV 66
Query: 382 VTIGECRPLSKTVRFNVLKV 441
V I +CRP+SKT F V ++
Sbjct: 67 VRIEQCRPISKTKHFAVAEI 86
>UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22;
Bacteria|Rep: 30S ribosomal protein S17 - Mycobacterium
bovis
Length = 135
Score = 35.5 bits (78), Expect = 0.63
Identities = 26/88 (29%), Positives = 40/88 (45%)
Frame = +1
Query: 178 KKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCF 357
K P T R + G V KMQ TIV+ + P Y + + + + H
Sbjct: 45 KHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSV 104
Query: 358 RDVEIGDIVTIGECRPLSKTVRFNVLKV 441
IGD V++ E RPLS T R+ ++++
Sbjct: 105 AG--IGDRVSLMETRPLSATKRWRLVEI 130
>UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 - Gloeobacter
violaceus
Length = 83
Score = 35.5 bits (78), Expect = 0.63
Identities = 25/71 (35%), Positives = 34/71 (47%)
Frame = +1
Query: 229 GVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 408
G+V MQ T+V+ + PKY + R R H ++GD V I E PL
Sbjct: 8 GLVVSDAMQKTVVVAVENRVPHPKYKKIVVRTRKFKAHDEE--NRCKVGDRVRILESPPL 65
Query: 409 SKTVRFNVLKV 441
SKT R+ VL +
Sbjct: 66 SKTKRWVVLDI 76
>UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Psychrobacter arcticum
Length = 91
Score = 35.1 bits (77), Expect = 0.84
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 220 ILTG--VVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 393
+LTG V KM IT++I R H P Y + +R + H + GD+V I
Sbjct: 13 VLTGRVVSDKMDKSITVLIERLVRH--PLYGKQLRRSTKIKAHDEN--NVCQQGDLVRIK 68
Query: 394 ECRPLSKTVRFNVLKV 441
E RP+SKT + ++ V
Sbjct: 69 ETRPISKTKSWTLVDV 84
>UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast
precursor; n=13; Magnoliophyta|Rep: 30S ribosomal
protein S17, chloroplast precursor - Zea mays (Maize)
Length = 132
Score = 35.1 bits (77), Expect = 0.84
Identities = 24/70 (34%), Positives = 33/70 (47%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
R LTG V K T+ + L PKY R E+ + H P ++GD+V +
Sbjct: 33 RQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELQP 90
Query: 397 CRPLSKTVRF 426
RP+SKT F
Sbjct: 91 SRPISKTKHF 100
>UniRef50_A3TU64 Cluster: 30S ribosomal protein S17; n=3;
Rhodobacteraceae|Rep: 30S ribosomal protein S17 -
Oceanicola batsensis HTCC2597
Length = 109
Score = 34.7 bits (76), Expect = 1.1
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 217 RILTGVVQK--MKMQITIVIRRDYLH-YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 387
RIL GVV +T+ + R + H L K R K++R F+ GDIV
Sbjct: 4 RILRGVVTSDANAQTVTVSVERRFTHPVLQKTIRKSKKYRAHDA--DNAFKK---GDIVR 58
Query: 388 IGECRPLSKTVRFNVL 435
I EC P SKT R+ V+
Sbjct: 59 IQECAPKSKTKRWEVM 74
>UniRef50_Q233G5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 357
Score = 34.7 bits (76), Expect = 1.1
Identities = 24/94 (25%), Positives = 39/94 (41%)
Frame = +1
Query: 40 EKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 219
+K F T F KGG+ K++ L +K E+I G +R
Sbjct: 103 DKLFVSNDTYFKLMKGGLVCGYCHRPKDLNLDYKKGAESIYQKDFKPHACCKGVPRVRSD 162
Query: 220 ILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKR 321
G + M++T V R DY+ + + N+ EK+
Sbjct: 163 FFGGFYTQQPMELTTVHRTDYIPHPLEKNKSEKK 196
>UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2;
Bacteroides thetaiotaomicron|Rep: 30S ribosomal protein
S17 2 - Bacteroides thetaiotaomicron
Length = 98
Score = 34.7 bits (76), Expect = 1.1
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 223 LTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 402
+ G+V KMQ T+VI + PKY + + + +H P + +GD V E R
Sbjct: 26 IEGIVVSTKMQKTVVIEVERTKKHPKYGKTVQYTKKYKIH-DP-LEECSVGDRVLAHETR 83
Query: 403 PLSKTVRF 426
SKT F
Sbjct: 84 HFSKTKYF 91
>UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase
domain-containing protein YALI0D16379g; n=1; Yarrowia
lipolytica|Rep: Patatin-like phospholipase
domain-containing protein YALI0D16379g - Yarrowia
lipolytica (Candida lipolytica)
Length = 818
Score = 34.7 bits (76), Expect = 1.1
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +1
Query: 145 PREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRH 324
P E ++ YI K +T S+ V K KM T ++ D+ HYL Y++ EKR
Sbjct: 102 PLEPVQKEYITSKHDWTPVFSVLKN--NNSVNKRKMSHT-ALKSDFKHYLDMYDKEEKRR 158
Query: 325 RNMS 336
R S
Sbjct: 159 RGKS 162
>UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Parvularcula bermudensis HTCC2503
Length = 93
Score = 34.3 bits (75), Expect = 1.5
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
RIL G + K + T+V+R D P + +R + H ++++G V I E
Sbjct: 4 RILQGPIVSDKGEKTVVVRVDRAFKHPLLAKVVRRSKRYHAHDES--NELKVGQRVLIRE 61
Query: 397 CRPLSKTVRFNVL 435
C P SK R+ V+
Sbjct: 62 CPPKSKLKRWEVV 74
>UniRef50_Q4P4F8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 125
Score = 34.3 bits (75), Expect = 1.5
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 223 LTGVVQK---MKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 393
+ G+V K M +T+ + R +H PK + RH+ VH + +GD +
Sbjct: 6 IEGIVTKAGVMAKTVTVTVERRLIH--PKLLKPYIRHKKYLVHDEN--NSLSVGDKIVAS 61
Query: 394 ECRPLSKTVRFNV 432
CRPLS RF +
Sbjct: 62 ACRPLSARKRFTL 74
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 33.9 bits (74), Expect = 1.9
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 79 RKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTG 231
R G +R+D + H N G RE + GT+ K TG S G +TG
Sbjct: 39 RHGIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHVTGTHSSTGTHVTG 89
>UniRef50_Q5LW49 Cluster: 30S ribosomal protein S17; n=22;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Silicibacter pomeroyi
Length = 76
Score = 33.9 bits (74), Expect = 1.9
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +1
Query: 217 RILTGVVQK--MKMQITIVIRRDYLH-YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 387
RIL G V +T+++ R + H L K R K++R H ++GD V
Sbjct: 4 RILQGTVTSDANAQTVTVLVERRFTHPVLKKTIRKSKKYR---AHDEK--NAFKVGDTVR 58
Query: 388 IGECRPLSKTVRFNVLK 438
I EC P SKT R+ VL+
Sbjct: 59 IIECAPKSKTKRWEVLE 75
>UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Bartonella henselae (Rochalimaea henselae)
Length = 79
Score = 33.9 bits (74), Expect = 1.9
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
R+L GVV K T+V++ + + P + ++ + H +IGD + I E
Sbjct: 4 RVLQGVVVSDKNDKTVVVKVERRYSHPLLKKTVRQSKKYKAHDES--NQFKIGDQIFIQE 61
Query: 397 CRPLSKTVRFNVLK 438
+P+SK R+ V+K
Sbjct: 62 SKPISKDKRWIVVK 75
>UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983;
n=1; Thermoplasma acidophilum|Rep: Putative
uncharacterized protein Ta0983 - Thermoplasma
acidophilum
Length = 322
Score = 33.5 bits (73), Expect = 2.6
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 268 IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
IRRD L+ + +YNR R + + P F IG+IV IGE
Sbjct: 182 IRRDDLNRIDRYNRIRITGRR--IRMKPLFEVASIGNIVGIGE 222
>UniRef50_A5Z5U7 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 317
Score = 33.1 bits (72), Expect = 3.4
Identities = 17/63 (26%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Frame = -3
Query: 330 IPVPFLEPIVFG*V---VKVIAADHDSYLHLHLLNDAGEDAAADRNVASEGTLLVNVGTL 160
+ +P++ PI+ G + V +++ + ++ +++ G++A A +NVASEGT N+ T+
Sbjct: 123 LKIPYIVPIIAGLICTPVSIVSVTFGTIVY-YMIAVIGKNADAIQNVASEGTNAANLNTV 181
Query: 159 NRL 151
++
Sbjct: 182 LKM 184
>UniRef50_Q2JFG7 Cluster: 30S ribosomal protein S17; n=19;
Bacteria|Rep: 30S ribosomal protein S17 - Frankia sp.
(strain CcI3)
Length = 102
Score = 33.1 bits (72), Expect = 3.4
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
++ G+V KM T+V+ + P Y + +R + + H +GD V + E
Sbjct: 25 KVREGLVVSDKMTKTVVVAVEDRVQHPLYGKTIRRTKKVKAHDES--GTTGVGDRVLLME 82
Query: 397 CRPLSKTVRFNVLKV 441
RPLS T R+ +++V
Sbjct: 83 TRPLSATKRWRIVQV 97
>UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144;
Bacteria|Rep: 30S ribosomal protein S17 - Burkholderia
mallei (Pseudomonas mallei)
Length = 90
Score = 32.7 bits (71), Expect = 4.5
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +1
Query: 217 RILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 396
R L G V KM T+ + ++ P Y ++ R + H GD+V I E
Sbjct: 11 RTLVGKVVSNKMDKTVTVLVEHRVKHPIYGKYVVRSKKYHAHDEA--NTYNEGDLVEIQE 68
Query: 397 CRPLSKTVRFNVLKV 441
RP+SKT + V ++
Sbjct: 69 TRPVSKTKAWAVSRL 83
>UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 306.t00001 - Entamoeba histolytica HM-1:IMSS
Length = 499
Score = 32.3 bits (70), Expect = 5.9
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +1
Query: 172 IDKKCPFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHY----LPKYNRFEKRHRNMSV 339
+ K C F ++ ++ +I++ +V K+ M ++RR Y + K+ K N
Sbjct: 315 LGKYCYFKDDILLQPQIISAIVSKLSMTDKTILRRGYWMLSNISVSKFPETTKAIINSGA 374
Query: 340 HLSPCFRDVEIGDIVTIGE-CRPLSKTV 420
LS C +E D+ E C L+ T+
Sbjct: 375 FLSSCCTILETNDVKIKSEACWLLANTI 402
>UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1;
Campylobacter upsaliensis RM3195|Rep: Putative
uncharacterized protein - Campylobacter upsaliensis
RM3195
Length = 342
Score = 32.3 bits (70), Expect = 5.9
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 40 EKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 219
EK Q + +N K+ +H + G+ + +E+I+ + DKK FTG + + G
Sbjct: 9 EKIIFSQLSTLINGLDCSKQSLEQHKEQEGIVYVKDKESIQSSSTDKKISFTGKI-LNGG 67
Query: 220 IL 225
IL
Sbjct: 68 IL 69
>UniRef50_Q7U4J1 Cluster: 30S ribosomal protein S17; n=6;
Synechococcus|Rep: 30S ribosomal protein S17 -
Synechococcus sp. (strain WH8102)
Length = 103
Score = 32.3 bits (70), Expect = 5.9
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +1
Query: 202 VSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 381
++++ R+ T V KM+ + + + + H P Y + R H +GD
Sbjct: 1 MAVKERVGTVVSDKMEKTVVVAVESRFPH--PIYQKTVSRTTRYKAHDED--NSCRVGDR 56
Query: 382 VTIGECRPLSKTVRFNVLKV 441
V I E RP+S+ R+ + +V
Sbjct: 57 VRITETRPMSRHKRWAIAEV 76
>UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin
CG33103-PB, isoform B isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Papilin CG33103-PB,
isoform B isoform 1 - Apis mellifera
Length = 2807
Score = 31.9 bits (69), Expect = 7.8
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 283 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 408
L+ +P+ RF RH+ M + +PC +VE D+ G+C P+
Sbjct: 140 LNCMPRGERFFYRHKLMVIDGTPC--EVEKNDVCVGGKCMPV 179
>UniRef50_Q9AIF7 Cluster: Ribosomal protein S17; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein S17 -
Carsonella ruddii
Length = 83
Score = 31.9 bits (69), Expect = 7.8
Identities = 16/74 (21%), Positives = 42/74 (56%)
Frame = +1
Query: 220 ILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 399
+L +++ IT++++++YL + KY + + + + ++ F++ GD V I +
Sbjct: 7 LLGRIIKINNFIITVIVKKNYL--IKKYKK--RINYYLKINAYDMFKECFFGDYVLIRKS 62
Query: 400 RPLSKTVRFNVLKV 441
RP+ K + + ++K+
Sbjct: 63 RPIKKIIFWILVKI 76
>UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ion transport protein -
Mariprofundus ferrooxydans PV-1
Length = 256
Score = 31.9 bits (69), Expect = 7.8
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 77 TGKVA*RGRTCVTIRMLV*ASKLPERRLRVPTLTRSVPSL 196
TG++A R +R+L + +PE RL V TL RS+PS+
Sbjct: 83 TGELAMLARLARLLRVLRLITAIPELRLIVATLMRSIPSM 122
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,394,321
Number of Sequences: 1657284
Number of extensions: 9023359
Number of successful extensions: 23075
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 22459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23022
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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