Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_P09
(482 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73426-1|CAA97792.1| 155|Caenorhabditis elegans Hypothetical pr... 202 1e-52
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 28 3.1
U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z83237-1|CAB05786.2| 423|Caenorhabditis elegans Hypothetical pr... 27 5.4
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 27 7.1
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 7.1
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81478-1|CAB03932.1| 199|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z79604-4|CAB60456.1| 598|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z79601-3|CAB01883.2| 640|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z73426-1|CAA97792.1| 155|Caenorhabditis elegans Hypothetical
protein F40F11.1 protein.
Length = 155
Score = 202 bits (492), Expect = 1e-52
Identities = 95/142 (66%), Positives = 112/142 (78%), Gaps = 3/142 (2%)
Frame = +1
Query: 25 MADQTEKAFQKQATVFLNRKGGM---KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFT 195
M++QTE+AF KQ TV LN K + +K R+ + VGLGFK PR+A+EGTYIDKKCP+
Sbjct: 1 MSEQTERAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPRDAVEGTYIDKKCPWA 60
Query: 196 GNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIG 375
GNV IRG ILTGVV K KM TIV+RRDYLHY+ KY R+EKRH+N+ H SP FRD+ G
Sbjct: 61 GNVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAHCSPAFRDIHPG 120
Query: 376 DIVTIGECRPLSKTVRFNVLKV 441
D+VTIGECRPLSKTVRFNVLKV
Sbjct: 121 DLVTIGECRPLSKTVRFNVLKV 142
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 28.3 bits (60), Expect = 3.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 97 SSCHLSCSGKRWPVSETLSLSD 32
+SC++ CSG++W E S S+
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSE 1032
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 28.3 bits (60), Expect = 3.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 97 SSCHLSCSGKRWPVSETLSLSD 32
+SC++ CSG++W E S S+
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSE 1032
>U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical
protein F47D12.5 protein.
Length = 633
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 435 QNIESNCFGQRSAFADRYNITNLHVPEARRQMHGH 331
+++E CF Q F D +N+T L + + R M+ H
Sbjct: 129 RSVELECFEQ---FVDLFNLTGLRILDVSRSMYKH 160
>Z83237-1|CAB05786.2| 423|Caenorhabditis elegans Hypothetical
protein R06B9.1 protein.
Length = 423
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 109 ACPSSSCHLSCSGKRWPVSETLSLSDPP 26
AC S LS WP S TL L+ PP
Sbjct: 92 ACKDGSNELSAGDYVWPFSYTLPLNVPP 119
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 10 ICQXKMADQTEKAFQKQATVFLNR 81
+ Q M+D+TEK+F+ + LNR
Sbjct: 3328 LAQPNMSDETEKSFEIPRNILLNR 3351
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 10 ICQXKMADQTEKAFQKQATVFLNR 81
+ Q M+D+TEK+F+ + LNR
Sbjct: 3328 LAQPNMSDETEKSFEIPRNILLNR 3351
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 26.6 bits (56), Expect = 9.4
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -3
Query: 357 EARRQMHGHIPVPFLEPIVFG*VVKVIAADHD--SYLHLHLLNDAGEDAAADRNVASEGT 184
E +HG +P P+ F V KV AD + Y ++ GE+ AD+ A +
Sbjct: 3668 EVMPYLHGSVP-PYSPK--FTPVKKVDKADEERKKYTVIYRFRHEGEEDFADKPEAYGFS 3724
Query: 183 LLVNVGTLNRLSGSFE 136
V G+LN +S S E
Sbjct: 3725 SDVYTGSLNEISRSSE 3740
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 26.6 bits (56), Expect = 9.4
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -3
Query: 357 EARRQMHGHIPVPFLEPIVFG*VVKVIAADHD--SYLHLHLLNDAGEDAAADRNVASEGT 184
E +HG +P P+ F V KV AD + Y ++ GE+ AD+ A +
Sbjct: 3657 EVMPYLHGSVP-PYSPK--FTPVKKVDKADEERKKYTVIYRFRHEGEEDFADKPEAYGFS 3713
Query: 183 LLVNVGTLNRLSGSFE 136
V G+LN +S S E
Sbjct: 3714 SDVYTGSLNEISRSSE 3729
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 26.6 bits (56), Expect = 9.4
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -3
Query: 357 EARRQMHGHIPVPFLEPIVFG*VVKVIAADHD--SYLHLHLLNDAGEDAAADRNVASEGT 184
E +HG +P P+ F V KV AD + Y ++ GE+ AD+ A +
Sbjct: 3657 EVMPYLHGSVP-PYSPK--FTPVKKVDKADEERKKYTVIYRFRHEGEEDFADKPEAYGFS 3713
Query: 183 LLVNVGTLNRLSGSFE 136
V G+LN +S S E
Sbjct: 3714 SDVYTGSLNEISRSSE 3729
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 26.6 bits (56), Expect = 9.4
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -3
Query: 357 EARRQMHGHIPVPFLEPIVFG*VVKVIAADHD--SYLHLHLLNDAGEDAAADRNVASEGT 184
E +HG +P P+ F V KV AD + Y ++ GE+ AD+ A +
Sbjct: 3668 EVMPYLHGSVP-PYSPK--FTPVKKVDKADEERKKYTVIYRFRHEGEEDFADKPEAYGFS 3724
Query: 183 LLVNVGTLNRLSGSFE 136
V G+LN +S S E
Sbjct: 3725 SDVYTGSLNEISRSSE 3740
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 26.6 bits (56), Expect = 9.4
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -3
Query: 357 EARRQMHGHIPVPFLEPIVFG*VVKVIAADHD--SYLHLHLLNDAGEDAAADRNVASEGT 184
E +HG +P P+ F V KV AD + Y ++ GE+ AD+ A +
Sbjct: 3657 EVMPYLHGSVP-PYSPK--FTPVKKVDKADEERKKYTVIYRFRHEGEEDFADKPEAYGFS 3713
Query: 183 LLVNVGTLNRLSGSFE 136
V G+LN +S S E
Sbjct: 3714 SDVYTGSLNEISRSSE 3729
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 26.6 bits (56), Expect = 9.4
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -3
Query: 357 EARRQMHGHIPVPFLEPIVFG*VVKVIAADHD--SYLHLHLLNDAGEDAAADRNVASEGT 184
E +HG +P P+ F V KV AD + Y ++ GE+ AD+ A +
Sbjct: 3657 EVMPYLHGSVP-PYSPK--FTPVKKVDKADEERKKYTVIYRFRHEGEEDFADKPEAYGFS 3713
Query: 183 LLVNVGTLNRLSGSFE 136
V G+LN +S S E
Sbjct: 3714 SDVYTGSLNEISRSSE 3729
>Z81478-1|CAB03932.1| 199|Caenorhabditis elegans Hypothetical
protein C31G12.1 protein.
Length = 199
Score = 26.6 bits (56), Expect = 9.4
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -3
Query: 378 ITNLHVPEARRQMHGHIPVPFLEPIVFG*VVKVIAADHDSYLHLHLL 238
I+++ +PE R+ H HI + L ++F + +I A + Y HL L+
Sbjct: 125 ISSIELPEKTRRSHEHIKLHRLLVLIFVFYIGLILAIKNGY-HLTLV 170
>Z79604-4|CAB60456.1| 598|Caenorhabditis elegans Hypothetical
protein ZK662.5 protein.
Length = 598
Score = 26.6 bits (56), Expect = 9.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 333 VRAFVALLQGRGDW*YCNDRRMQ 401
+RAFV L++ DW Y RRMQ
Sbjct: 250 LRAFVRLIRNNSDW-YARYRRMQ 271
>Z79601-3|CAB01883.2| 640|Caenorhabditis elegans Hypothetical
protein K09A9.1 protein.
Length = 640
Score = 26.6 bits (56), Expect = 9.4
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +1
Query: 187 PFTGNVSIRGRILTGVVQKMKMQITIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 366
PF GN S R R+ V+ K K + ++ +Y HY + N + +N L C+
Sbjct: 43 PFVGNTSSRPRVFYDVLAK-KNVVFPNVKAEY-HYRVR-NAPKIDPKNFGTTLPICYS-- 97
Query: 367 EIGDIVTIGECRPLSK 414
IG T+ E RPL +
Sbjct: 98 SIGPAKTL-ELRPLGR 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,777,733
Number of Sequences: 27780
Number of extensions: 215636
Number of successful extensions: 576
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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