Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_P05
(498 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 101 1e-20
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 79 5e-14
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 72 8e-12
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 71 1e-11
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 70 3e-11
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 58 8e-08
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 58 8e-08
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 56 6e-07
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 53 4e-06
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 52 7e-06
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 50 3e-05
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 46 5e-04
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 46 6e-04
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 45 0.001
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 44 0.003
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 43 0.003
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 43 0.004
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 42 0.008
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 40 0.023
UniRef50_A0CRF6 Cluster: Chromosome undetermined scaffold_25, wh... 40 0.041
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 37 0.29
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 36 0.38
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 34 1.5
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 34 2.0
UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26; Archa... 34 2.0
UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic... 33 3.6
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 33 4.7
UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;... 32 6.2
UniRef50_Q2MG17 Cluster: Putative uncharacterized protein; n=1; ... 32 6.2
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 101 bits (241), Expect = 1e-20
Identities = 47/52 (90%), Positives = 50/52 (96%)
Frame = +2
Query: 155 VTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 310
VTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLITNIGSGVGAAPA G
Sbjct: 23 VTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGG 74
Score = 40.3 bits (90), Expect = 0.023
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +1
Query: 88 MVSKAELACVYSALILVDDDVA 153
M +KAELACVY++LILVDDDVA
Sbjct: 1 MSTKAELACVYASLILVDDDVA 22
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 79.0 bits (186), Expect = 5e-14
Identities = 42/55 (76%), Positives = 44/55 (80%), Gaps = 4/55 (7%)
Frame = +2
Query: 155 VTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGV----GAAPAA 307
VT EKISTI A VD+EPYWPGLF KALEGINV+DLITNIGSGV GAAP A
Sbjct: 33 VTDEKISTI--QANVDIEPYWPGLFTKALEGINVKDLITNIGSGVETGGGAAPTA 85
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 71.7 bits (168), Expect = 8e-12
Identities = 32/52 (61%), Positives = 42/52 (80%)
Frame = +2
Query: 155 VTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 310
VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G G APAAG
Sbjct: 23 VTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG-GPAPAAG 73
Score = 34.3 bits (75), Expect = 1.5
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1
Query: 88 MVSKAELACVYSALILVDDDV 150
M S +ELAC+YSALIL DD+V
Sbjct: 1 MASVSELACIYSALILHDDEV 21
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 71.3 bits (167), Expect = 1e-11
Identities = 35/43 (81%), Positives = 37/43 (86%), Gaps = 4/43 (9%)
Frame = +2
Query: 191 AAVDVEPYWPGLFAKALEGINVRDLITNIGSGV----GAAPAA 307
A VD+EPYWP LFAKALEGINV+DLITNIGSGV GAAPAA
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLITNIGSGVGTGGGAAPAA 48
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 70.5 bits (165), Expect = 2e-11
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +2
Query: 155 VTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 283
VT EKISTILKAA +VEPYW LFAKALEGINV+DLITNIGS
Sbjct: 48 VTDEKISTILKAA--NVEPYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 69.7 bits (163), Expect = 3e-11
Identities = 32/58 (55%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +2
Query: 149 LPVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAGWSA 319
L +T +K+ ++ AA V ++EP W LFAKALEG +V+DL+ N+GSG GAAPAAG +A
Sbjct: 20 LEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLLLNVGSGGGAAPAAGGAA 77
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 58.4 bits (135), Expect = 8e-08
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +2
Query: 149 LPVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 310
+PVT E I I+ AA VEPY+PGLFA+AL NV D++ G+ A P AG
Sbjct: 31 VPVTSENIKKIISAAGGSVEPYFPGLFAQALSTTNVSDIVAGCGAASVAVPVAG 84
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 58.4 bits (135), Expect = 8e-08
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +2
Query: 152 PVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 310
P+T EK+ +L AA + DVEP W LFAKALEG +V+D++T + S G A G
Sbjct: 22 PITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDILTEVASAAGGVVAGG 75
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 55.6 bits (128), Expect = 6e-07
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +2
Query: 149 LPVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 286
+ +T E IS ++K A V+VE YWP LFAK E N+ DLI N+G+G
Sbjct: 20 IEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIMNVGAG 65
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 52.8 bits (121), Expect = 4e-06
Identities = 25/53 (47%), Positives = 38/53 (71%)
Frame = +2
Query: 149 LPVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAA 307
L VT + I ++KAA D++P+ P LFA+AL+G ++ L++ +GSG AAPAA
Sbjct: 31 LDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDLGSLLSAVGSGAAAAPAA 83
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 52.0 bits (119), Expect = 7e-06
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +2
Query: 155 VTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG-VGAAPAA 307
+T E I+T+L A + VE +WP + AKAL N+ DLI + GS V AAPAA
Sbjct: 26 ITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMDAGSAPVAAAPAA 77
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 50.0 bits (114), Expect = 3e-05
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 149 LPVTGEKISTILKAAAVD-VEPYWPGLFAKALEGINVRDLITNIGSGVGAA 298
+ VT +KI+TILKAA + VE Y P LFA +L G NV+DL+ ++GS +A
Sbjct: 20 IDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLLMSMGSPAPSA 70
Score = 35.9 bits (79), Expect = 0.51
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = +1
Query: 91 VSKAELACVYSALILVDDDV 150
+SK+ELACVY+AL+L DDD+
Sbjct: 1 MSKSELACVYAALMLADDDI 20
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 46.0 bits (104), Expect = 5e-04
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +2
Query: 155 VTGEKISTILKAAAVDVEPYWPGLFAKALEGI 250
V +KI+T +KAA ++VEP+WPGLFAK+L +
Sbjct: 36 VMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 45.6 bits (103), Expect = 6e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +2
Query: 155 VTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 310
+T EK+ ++ A V+VE W LFAKALEG ++++ N + AA A G
Sbjct: 21 ITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFNFSAAPAAAAAGG 72
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = +2
Query: 149 LPVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT---NIGSGVGAAPAAGWSA 319
L +T + + TI KAA +V+ W ++AKALEG +++++++ N G GA A+G +A
Sbjct: 18 LEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILSGFHNAGPVAGAGAASGAAA 77
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 43.6 bits (98), Expect = 0.003
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +2
Query: 158 TGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPA 304
T + +I AA V V+ W LFA LEG NV++L+T +GS AAPA
Sbjct: 23 TAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTTLGS-ASAAPA 70
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 43.2 bits (97), Expect = 0.003
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +2
Query: 149 LPVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAA 307
+ +T E I ++K + V PY P LF KAL+G ++ L++N+ G G APAA
Sbjct: 31 MSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDIEGLLSNLSVG-GGAPAA 82
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 42.7 bits (96), Expect = 0.004
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +2
Query: 155 VTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 310
+ + ++ ++ A+ + ++ +W L+A + NV DLI N+ G AAPAAG
Sbjct: 21 INADSLAKVVAASGLKLDQFWVNLYADYFKKANVADLIKNVSLGGAAAPAAG 72
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 41.9 bits (94), Expect = 0.008
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 155 VTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI-TNIGSGVGAAPAA 307
+ K++ I+KAA + VEP W +F KAL+G V DL+ N GS A AA
Sbjct: 35 INAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLLHGNSGSAPAAQAAA 86
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 40.3 bits (90), Expect = 0.023
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +2
Query: 155 VTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS--GVGAAPAAG 310
+T E I+ +L A+ ++V PYWP +FA+ ++G + ++ + G G AAG
Sbjct: 138 ITEENINKLLSASKIEVAPYWPKMFAEIVKGKDFDKIMEDSAGAPGAGGGAAAG 191
>UniRef50_A0CRF6 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_25,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 151
Score = 39.5 bits (88), Expect = 0.041
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 152 PVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAA 307
P+T + + + K A V+V F KA EG ++ L++ +G G G+APAA
Sbjct: 66 PLTADNVEKLTKKAGVNVPKQLAAAFVKAFEGKDILSLLS-VGGGQGSAPAA 116
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 36.7 bits (81), Expect = 0.29
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 164 EKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 310
+ + + KAA VDV FA L+ +++ D+++ + G G APAAG
Sbjct: 25 DSLLKVTKAAGVDVSKGMASAFASILKNVDINDVLSKVSFG-GVAPAAG 72
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 36.3 bits (80), Expect = 0.38
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +2
Query: 149 LPVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI------TNIGSGVGAAPAAG 310
LP + E I+ +KAA V V P P +FA+ LE +V L+ + AAPAAG
Sbjct: 20 LPTSAENIAAAVKAAGVSVRPTMPIIFARFLEKKSVEALMAAAATQAPTATSAAAAPAAG 79
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 34.3 bits (75), Expect = 1.5
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 149 LPVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAA 307
LP + E I+ +KAA V++ P P +FA+ LE +V L+ + A +A
Sbjct: 20 LPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLMAAAAAQAPTAASA 72
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 33.9 bits (74), Expect = 2.0
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 167 KISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 310
KI IL++ +++E ALEG +V +LIT + A PAAG
Sbjct: 21 KIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKLAAVPAAG 68
>UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26;
Archaea|Rep: 50S ribosomal protein L12P - Archaeoglobus
fulgidus
Length = 106
Score = 33.9 bits (74), Expect = 2.0
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 155 VTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITN--IGSGVGAAPAAGWSA 319
+T + + +L+AA V+V+ ALEG+N+ + I + V AAPAA +A
Sbjct: 17 ITEDNVKAVLEAAGVEVDEARVKALVAALEGVNIDEAIQKAAMPMAVAAAPAAAAAA 73
>UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4 - Mus musculus
Length = 88
Score = 33.1 bits (72), Expect = 3.6
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 88 MVSKAELACVYSALILVDDD 147
M S +ELAC+YSALIL +DD
Sbjct: 1 MASASELACIYSALILHEDD 20
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 32.7 bits (71), Expect = 4.7
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 164 EKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAA 307
+ I + KAA V+V FA AL +NV +++ +I G AA A
Sbjct: 24 DSICAVTKAAGVEVSHGMAAAFANALAAVNVNEVLGSISFGGAAAGGA 71
>UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;
n=16; Burkholderiaceae|Rep: Transcriptional regulator,
AraC family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 352
Score = 32.3 bits (70), Expect = 6.2
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 155 VTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 277
VT E+ ST+ + A+D++ PG+F++ L G ++ L ++
Sbjct: 66 VTEEQFSTLYRTLAIDLDDEMPGIFSRPLRGGTLKYLCLSL 106
>UniRef50_Q2MG17 Cluster: Putative uncharacterized protein; n=1;
Micromonospora olivasterospora|Rep: Putative
uncharacterized protein - Micromonospora olivasterospora
Length = 472
Score = 32.3 bits (70), Expect = 6.2
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 249 MPSKALANRPGQYGSTSTAAAFKMVEIFSPVTGNIIIHQDESRV 118
MPS RPG ++T AA EI +P+ G + ++ D +R+
Sbjct: 1 MPSDPTRQRPGHGHGSTTLAAVNTAEIEAPIVG-VTVYPDRARI 43
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,214,844
Number of Sequences: 1657284
Number of extensions: 7210023
Number of successful extensions: 19014
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19008
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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