Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_P04
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   6.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   6.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   6.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   6.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   6.7  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   6.7  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   6.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   6.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.9  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +3

Query: 513 FDEPRLPNTSSDKRA--NFKIAEFAKKYNLXDPIAGNFYEAQYDDYV 647
           FD     NTS+ K    N  +  F  K    +P+    +EA  ++YV
Sbjct: 207 FDNDCNKNTSTSKEIALNNDVLLFFVKVFRPEPLCERLFEASREEYV 253


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = +1

Query: 463 ACTDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLPSSPRSTTXGIRLRATSTKRS 633
           ACTD  SSC +    S      SL L    +P S  P SP + T   +  A +   S
Sbjct: 32  ACTDDLSSCWSEDMGSF-----SLPLDLEPLP-SLFPFSPCNNTANYKSEAQNQPSS 82


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 460  QACTDTCSSCTNNHRSSHSTSRDSLTLRATNVP 558
            Q   D   + TNN R+  +TS  S+     N+P
Sbjct: 995  QKLCDKTETHTNN-RTHSATSNSSVNANTNNIP 1026


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 495 QPSKLTFDEPRLPNTSSDKRANFKIAEFAKKYNLXDP 605
           QP +L     + PNT +   A+ K A+      +  P
Sbjct: 77  QPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASP 113


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 495 QPSKLTFDEPRLPNTSSDKRANFKIAEFAKKYNLXDP 605
           QP +L     + PNT +   A+ K A+      +  P
Sbjct: 77  QPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASP 113


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 495 QPSKLTFDEPRLPNTSSDKRANFKIAEFAKKYNLXDP 605
           QP +L     + PNT +   A+ K A+      +  P
Sbjct: 77  QPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASP 113


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 495 QPSKLTFDEPRLPNTSSDKRANFKIAEFAKKYNLXDP 605
           QP +L     + PNT +   A+ K A+      +  P
Sbjct: 77  QPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASP 113


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 495 QPSKLTFDEPRLPNTSSDKRANFKIAEFAKKYNLXDP 605
           QP +L     + PNT +   A+ K A+      +  P
Sbjct: 77  QPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASP 113


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 495 QPSKLTFDEPRLPNTSSDKRANFKIAEFAKKYNLXDP 605
           QP +L     + PNT +   A+ K A+      +  P
Sbjct: 33  QPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASP 69


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 495 QPSKLTFDEPRLPNTSSDKRANFKIAEFAKKYNLXDP 605
           QP +L     + PNT +   A+ K A+      +  P
Sbjct: 77  QPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASP 113


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 495 QPSKLTFDEPRLPNTSSDKRANFKIAEFAKKYNLXDP 605
           QP +L     + PNT +   A+ K A+      +  P
Sbjct: 77  QPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASP 113


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +2

Query: 332 APSRKEPTFREWHHWLVGNIQGQRGKLRR 418
           A + ++P F  WH ++    Q  +  L R
Sbjct: 391 ATAMRDPIFYRWHSYIDDIFQEYKATLPR 419


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 430 WDKVSPEFTSLXL 392
           W K+ P FTSL L
Sbjct: 228 WAKLVPHFTSLPL 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,665
Number of Sequences: 336
Number of extensions: 3960
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)