Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_O10
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 148 8e-37
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 129 3e-31
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 105 4e-24
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 100 2e-22
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 79 7e-16
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 39 5e-04
SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomy... 30 0.34
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 28 1.4
SPBC244.01c |sid4||SIN component scaffold protein Sid4 |Schizosa... 26 4.1
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 26 5.5
SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4 |Schiz... 25 7.2
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 25 7.2
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 9.5
SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr 3||... 25 9.5
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 25 9.5
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 25 9.5
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 25 9.5
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 148 bits (358), Expect = 8e-37
Identities = 76/197 (38%), Positives = 104/197 (52%)
Frame = +1
Query: 64 LFIDNEWVDAKDGETFDTFSPHDGSVIAKVAKGQXXXXXXXXXXXXXXFQRNSEWRLADA 243
LFI+N+ VD+ G +SP +I +VA FQ ++ WR +
Sbjct: 25 LFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTDAPWRKFSS 84
Query: 244 SQRGKLLYKFADLIERDFEYLAKLESYDNGMVYKNCLRILSGIPDSVRYLGSLADKIQGD 423
+QRG+ L + AD IE++ EYLA +E+ DNG + D RY G ADK G
Sbjct: 85 AQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRYYGGWADKDYGQ 144
Query: 424 TIPTDGDSFSYTLKQPVGVCGLILPWNVPILMFLNKVVTALAAGCTVVVKPAEQTPLTXX 603
TI TD F+YT +P+GVCG I+PWN P LM K+ A+A G T+++K AE TPL+
Sbjct: 145 TIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLSAL 204
Query: 604 XXXXXXKEAGIPKGVVN 654
E G P GV+N
Sbjct: 205 CLTKFVPECGFPPGVIN 221
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 129 bits (312), Expect = 3e-31
Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)
Frame = +1
Query: 64 LFIDNEWVDAKDGETFDTFSPHDGSVIAKVAKGQXXXXXXXXXXXXXXFQRNSEWRLADA 243
L+I+ EW K ET++T P VIAKV F+ W+
Sbjct: 23 LYINGEW--HKSAETWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKT---WKKVPG 77
Query: 244 SQRGKLLYKFADLIERDFEYLAKLESYDNGM-VYKNCLRILSGIPDSVRYLGSLADKIQG 420
S++G+LL K A+L E+ + LA +E+ D+G + N + G +RY ADKI G
Sbjct: 78 SEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYG 137
Query: 421 DTIPTDGDSFSYTLKQPVGVCGLILPWNVPILMFLNKVVTALAAGCTVVVKPAEQTPLTX 600
IPT + +Y + P+GVCG I+PWN P+ M K+ ALAAG +++K AE TPL+
Sbjct: 138 QVIPTGPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSL 197
Query: 601 XXXXXXXKEAGIPKGVVN 654
+EAG PKGVVN
Sbjct: 198 LYFATLVEEAGFPKGVVN 215
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 105 bits (253), Expect = 4e-24
Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 1/197 (0%)
Frame = +1
Query: 67 FIDNEWVDAKDGETFDTFSPHDGSVIAKVAKGQXXXXXXXXXXXXXXFQRNSEWRLADAS 246
+I +WV A G+TFD +P +A V F +R +D
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAFL---SYRNSDIK 83
Query: 247 QRGKLLYKFADLIERDFEYLAKLESYDNGMVYKNCLRILSGIPDSVRYLGSLADKIQGDT 426
+R +L ++ DLI + + LA + + +NG + + + + A +I GD+
Sbjct: 84 ERYAILRRWYDLIMENADDLATMMTLENGKALGDAKGEVVYAAKFIDWFAGEALRISGDS 143
Query: 427 -IPTDGDSFSYTLKQPVGVCGLILPWNVPILMFLNKVVTALAAGCTVVVKPAEQTPLTXX 603
+ ++ + T+KQPVGV G+I PWN P M KV ALAAGCTVV++PA +TP T
Sbjct: 144 SMSSNPQNRIITIKQPVGVVGIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFTAL 203
Query: 604 XXXXXXKEAGIPKGVVN 654
+ AG+P GV+N
Sbjct: 204 ALAKLAERAGVPAGVLN 220
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 100 bits (240), Expect = 2e-22
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 2/202 (0%)
Frame = +1
Query: 55 YTKLFIDNEWVDAKDGETFDTFSPHDGSVIAKVAKGQXXXXXXXXXXXXXXFQRNSEWRL 234
+ + F+ +W+ + + +TF+ +P G +I KVA F+ +
Sbjct: 17 HAQSFVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAFKTYKNFTH 76
Query: 235 ADASQRGKLLYKFADLIERDFEYLAKLESYDNGMVYKNCLRILSGIPDSVRYLGSLADKI 414
QR +LL ++A+LI + + L K+ + +NG ++ +++ + A +
Sbjct: 77 V---QRSQLLERWAELIMENKDDLVKMLTLENGKPLSQAEMEVTTCSGYLKWYAAEAVRT 133
Query: 415 QGDTIPTD--GDSFSYTLKQPVGVCGLILPWNVPILMFLNKVVTALAAGCTVVVKPAEQT 588
GD P+ +F ++KQPVGV LI PWN P M K ALAAGCT + PA +T
Sbjct: 134 FGDVAPSSLQSQNFLISIKQPVGVSALITPWNFPAAMIARKGGAALAAGCTAIFLPAFRT 193
Query: 589 PLTXXXXXXXXKEAGIPKGVVN 654
P +EAG P GV+N
Sbjct: 194 PYVCLGLVRLAQEAGFPDGVLN 215
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 78.6 bits (185), Expect = 7e-16
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 5/202 (2%)
Frame = +1
Query: 64 LFIDNEWVDAKD--GETFDTFSPHDGSVIAKVAKGQXXXXXXXXXXXXXXFQRNSEWRLA 237
LFID ++V + + +P +I A F R+ W
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF-RSGIWAKW 81
Query: 238 DASQRGKLLYKFADLIERDFEYLAKLESYDNGMVYKNCLRILSGIPDSVRYLGSLADKIQ 417
QRG +L K A ++ E LA +++ + G L + D Y +A+
Sbjct: 82 PGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVAETDN 141
Query: 418 GDT---IPTDGDSFSYTLKQPVGVCGLILPWNVPILMFLNKVVTALAAGCTVVVKPAEQT 588
+P + ++ + P GV G+I PWN P+ M L K+V A+A+G VV+KP+E
Sbjct: 142 PTVKVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSELA 201
Query: 589 PLTXXXXXXXXKEAGIPKGVVN 654
P + KEAG+P GV+N
Sbjct: 202 PWSCLEFALICKEAGLPDGVLN 223
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 39.1 bits (87), Expect = 5e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 454 YTLKQPVGVCGLILPWNVPILMFLNKVVTALAAGCTVVVKPAEQT 588
Y +P+GV ++ WN P+ L +++AL AG +VVK +E T
Sbjct: 122 YVKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELT 166
>SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 754
Score = 29.9 bits (64), Expect = 0.34
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +2
Query: 92 RKMAKHLIHSVHTTDQSSLK*PKDKRL-ILTPQWQRRSVRSNVTQNGGWRMPRSAENYFT 268
+KM+K L + + + P+ RL L QW + + ++ EN+F
Sbjct: 407 QKMSKSLKNFITIKEILKKFTPRQLRLAFLLQQWNTQLDFKETLLAYVLNIEQALENFFR 466
Query: 269 SSQILLNATSNILRNSSHMTMAWFIKIALEYFQEF 373
+ + L+N T + N H+ F K+ +E ++F
Sbjct: 467 TVRALMNETEGVSANGGHVPEK-FDKLEIELLEKF 500
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 27.9 bits (59), Expect = 1.4
Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 4/146 (2%)
Frame = +1
Query: 226 WRLADASQRGKLLYKFADLIERDFEY--LAKLESYDNGMVYKNCLRILSGIPDSVRYLGS 399
W + R + K A LI + Y +A +++ + I D +R+
Sbjct: 97 WESLPFADRSAIFLKAAHLISTKYRYKLMAATMIGQGKNIWQAEIDAGMEIIDFLRFNTK 156
Query: 400 LADKIQGDTIPTDGDSFSYTLK-QPV-GVCGLILPWNVPILMFLNKVVTALAAGCTVVVK 573
A ++ P + ++ +P+ G I P+N + N L G V++K
Sbjct: 157 YASELYASQPPENTPGVWNRMEYRPLEGFVYAITPFNFTAIAG-NLAAAPLLMGNVVLMK 215
Query: 574 PAEQTPLTXXXXXXXXKEAGIPKGVV 651
P++ L+ +EAG+P G +
Sbjct: 216 PSDHAVLSSYIVYQIFREAGLPAGAL 241
>SPBC244.01c |sid4||SIN component scaffold protein Sid4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 247 QRGKLLYKFADLIERDFEYLAKLESYDNGMVYKNCL 354
Q+G+ LY++A R+ YL E+ +G+V K CL
Sbjct: 614 QQGRRLYQWA----RNIHYLIYEENMRDGLVSKQCL 645
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 271 FADLIERDFEYLAKLESYDNGMVYK 345
+ D E DFEY +LE+++ +YK
Sbjct: 578 YDDPKENDFEYQQRLETFETLRIYK 602
>SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 674
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 441 RFIQLHIETTRWSVWSHFTLE 503
RF+ +H E T W W+ F E
Sbjct: 196 RFVVVHPEVTNWLRWARFEEE 216
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +3
Query: 459 IETTRWSVWSHFTLERSHPDVSEQGRNCLSSRMYSGSEAGRTNS 590
IE T W + + FT R H E+ R CLS S A R NS
Sbjct: 206 IEKTNW-IEAEFT--RRHTKRKEKERACLSQN--QSSNASRANS 244
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +1
Query: 421 DTIPTDGDSFSYTLKQPVGVCGLILPWNVPILMFLNKVVTALAAGCTVVV 570
+T+ + F+ T+ PVG + +VP ++ + VT+ + G T +
Sbjct: 830 ETVTSGSVGFTTTIATPVGTTAGTVVVDVPTPSWVTETVTSGSVGFTTTI 879
>SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 465
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 445 SFSYTLKQPVGVCGLILPWNVPILMFLNKVVTALAA 552
+FSY + V V +L ++P L+ LN + LAA
Sbjct: 138 TFSYEVSPVVSVLSGVLLISLPTLILLNLCILKLAA 173
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 453 LHIETTRWSVWSHFTLERSHP 515
LH++ T W+HF ++ HP
Sbjct: 118 LHVDDTLDQQWAHFAGKQQHP 138
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 232 LADASQRGKLLYKFADLIERDFEY 303
L S R +LL + ADLIE+D E+
Sbjct: 1047 LNSLSNRQQLLDEAADLIEKDLEF 1070
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = -3
Query: 113 SNVSPSFASTHSLS---MNNLVYLISGTMFTA 27
+NV PS+AST SLS ++ Y GT+ +A
Sbjct: 72 TNVLPSYASTPSLSPMTSSHFPYASDGTLISA 103
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,738,437
Number of Sequences: 5004
Number of extensions: 56361
Number of successful extensions: 177
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -