Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_O10
(655 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 25 0.64
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 1.9
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 1.9
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 1.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.5
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 4.5
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 4.5
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 6.0
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 22 6.0
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 6.0
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 25.0 bits (52), Expect = 0.64
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2
Query: 161 DKRLILTPQWQRRSVRSNVTQNGGWR--MPRSAENY--FTSSQILLN 289
+ +LT W +V S G WR MPRS +Y SQI+++
Sbjct: 1204 ESETVLTLAWSESNVESKGRLLGFWRVEMPRSNADYEVCIGSQIMVS 1250
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 52 KYTKLFIDNEWVDAKDGETFDTFSP 126
K+TK+ ID E A+DG + SP
Sbjct: 236 KFTKMTIDGESYTAQDGISGMALSP 260
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 52 KYTKLFIDNEWVDAKDGETFDTFSP 126
K+TK+ ID E A+DG + SP
Sbjct: 236 KFTKMTIDGESYTAQDGISGMALSP 260
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 52 KYTKLFIDNEWVDAKDGETFDTFSP 126
K+TK+ ID E A+DG + SP
Sbjct: 236 KFTKMTIDGESYTAQDGISGMALSP 260
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 31 VNMVPEIKYTKLFIDNEWVDAK 96
VN+ +I T L+++ W D K
Sbjct: 68 VNLKNQIMTTNLWVEQSWYDYK 89
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 31 VNMVPEIKYTKLFIDNEWVDAK 96
VN+ +I T L+++ W D K
Sbjct: 68 VNLKNQIMTTNLWVEQSWYDYK 89
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 31 VNMVPEIKYTKLFIDNEWVDAK 96
VN+ +I T L+++ W D K
Sbjct: 64 VNLKNQIMTTNLWVEQSWYDYK 85
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 31 VNMVPEIKYTKLFIDNEWVDAK 96
VN+ +I T ++++ EW D K
Sbjct: 60 VNLKNQIMTTNVWVEQEWNDYK 81
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 437 SVGIVSPWILSARLPRY 387
+V + PWI + PRY
Sbjct: 327 TVSCIDPWIYAINHPRY 343
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 356 LRQFL*TMPLSYDSSFARYSKSRSIRS 276
+ + L MPL D SFA++S+ + S
Sbjct: 337 IHELLGHMPLLADPSFAQFSQEIGLAS 363
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 437 SVGIVSPWILSARLPRY 387
+V + PWI + PRY
Sbjct: 327 TVSCIDPWIYAINHPRY 343
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,439
Number of Sequences: 438
Number of extensions: 3867
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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