Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_O09
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0313 - 19475203-19475244,19475883-19475976,19476933-194771... 87 9e-18
05_06_0103 + 25597531-25597608,25597692-25597892,25598599-255987... 71 8e-13
01_01_0826 + 6431621-6431917,6432356-6432505,6432614-6432796,643... 69 3e-12
01_01_0824 + 6411899-6411931,6412001-6412210,6412302-6412451,641... 47 1e-05
04_04_1546 - 34301905-34302093,34302549-34302911,34303031-343034... 42 6e-04
02_01_0558 + 4109929-4110042,4110989-4111097,4111404-4111563,411... 30 1.9
03_05_0920 - 28812796-28813325,28814019-28816377 29 2.5
02_05_0940 - 32934214-32934906,32936049-32936185,32936281-329364... 29 3.3
06_01_0716 - 5207780-5208439,5209238-5209374,5209473-5209608,520... 29 4.3
10_05_0019 - 8049145-8049334,8059808-8060618,8060708-8060783,806... 28 5.7
01_05_0154 + 18667338-18670110,18670233-18670561,18670914-186709... 28 5.7
12_02_0045 + 12824766-12825417,12826608-12826753,12826825-128269... 28 7.5
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 28 7.5
02_05_0230 + 27029725-27030871,27030995-27031113,27031225-270313... 28 7.5
>06_03_0313 -
19475203-19475244,19475883-19475976,19476933-19477129,
19477254-19477394,19477873-19478073,19478775-19478894,
19479677-19479859,19479946-19480095,19481305-19481508,
19481545-19481547
Length = 444
Score = 87.4 bits (207), Expect = 9e-18
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Frame = +2
Query: 128 EEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVILP 307
EEME + +D+LRR V +A LE + ++ SR+V +V D L +AL KQQYD ++LP
Sbjct: 230 EEMEATMIIDILRRAKANVVVASLEETLEIVASRKVKMVADVLLDDAL--KQQYDLILLP 287
Query: 308 GGLEGSDSLSKSEK-VGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGRRVTSYPSTRDK 484
GGL G+ + +KS+K +G + K E N HG+ +G++ TS+P +K
Sbjct: 288 GGLGGAQAYAKSDKLIGLIKKQAEANKLYGAICASPAIALEPHGLLKGKKATSFPGMWNK 347
Query: 485 LS 490
LS
Sbjct: 348 LS 349
Score = 65.3 bits (152), Expect = 4e-11
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Frame = +2
Query: 128 EEMETVITVDMLRRGGVTVTLAGLE-GSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVIL 304
E ME VITVD+LRR G V++A ++ GS+ V + V L D +L + LA+ ++D + L
Sbjct: 11 EPMEAVITVDVLRRAGADVSVASVDPGSAQVGGAWGVKLAAD-ALLDDLAD-AEFDLISL 68
Query: 305 PGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXH-GVARGRRVTSYPSTRD 481
PGG+ GS +L + + ++K H GK G+ G + T YPS D
Sbjct: 69 PGGMPGSSNLRDCKLLENMVKKHAGKGKLYAAICAAPAVALGSWGLLNGLKATCYPSFMD 128
Query: 482 KL 487
KL
Sbjct: 129 KL 130
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3
Query: 531 VDGNVVTSRGPGTAYWFGLTLIXLLTGKEKADQVQKGMLI 650
+DGN VTSRGPGTA + + L+ L GKEKAD+V ML+
Sbjct: 143 IDGNCVTSRGPGTAMEYSVVLVEQLYGKEKADEVAGPMLM 182
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/40 (45%), Positives = 30/40 (75%)
Frame = +3
Query: 528 LVDGNVVTSRGPGTAYWFGLTLIXLLTGKEKADQVQKGML 647
+VDGN++TS+GPGT+ F L ++ L G+E+A ++ K M+
Sbjct: 359 VVDGNLITSQGPGTSMEFSLAIVEKLFGRERAVELAKTMV 398
>05_06_0103 +
25597531-25597608,25597692-25597892,25598599-25598748,
25598906-25599019,25599699-25599776,25600008-25600208,
25601312-25601399,25601432-25601742
Length = 406
Score = 70.9 bits (166), Expect = 8e-13
Identities = 35/88 (39%), Positives = 58/88 (65%)
Frame = +2
Query: 125 AEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVIL 304
+EEME ++ D+LRR V V LA +E S+ ++ S+++ +V DK +++A A +YD +IL
Sbjct: 216 SEEMEIIMLTDVLRRANVNVVLASVEKSTSIVGSQRMRIVADKCISDASA--LEYDLIIL 273
Query: 305 PGGLEGSDSLSKSEKVGALLKDHEDNGK 388
PGG G++ L KS + LLK+ + G+
Sbjct: 274 PGGPAGAERLHKSSVLKKLLKEQKQTGR 301
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/72 (45%), Positives = 39/72 (54%)
Frame = +2
Query: 128 EEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVILP 307
EEME VI +LRR G VTLA +E V SR +V DK + A Q +D V LP
Sbjct: 36 EEMEAVILAGVLRRAGADVTLASVEDGLEVEASRGSHIVADKRI--AACADQVFDLVALP 93
Query: 308 GGLEGSDSLSKS 343
GG+ GS L S
Sbjct: 94 GGMPGSVRLRDS 105
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 531 VDGNVVTSRGPGTAYWFGLTLIXLLTGKEKADQVQKGML 647
V G + TSRGPGTA+ F L+ + L G KA+ + +L
Sbjct: 144 VSGELTTSRGPGTAFQFALSFVEQLFGPCKAEDMDNTLL 182
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 528 LVDGNVVTSRGPGTAYWFGLTLIXLLTGKEKADQVQKGML 647
++DGN++T G GT F L +I G +A V GM+
Sbjct: 361 VIDGNLITGMGLGTVIDFSLAIIKKFFGHGRAKGVANGMV 400
>01_01_0826 +
6431621-6431917,6432356-6432505,6432614-6432796,
6433305-6433385,6433548-6433586,6433646-6433849,
6433933-6434073,6434270-6434437,6434498-6434518
Length = 427
Score = 68.9 bits (161), Expect = 3e-12
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Frame = +2
Query: 125 AEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSR-QVTLVPDKSLTEALAEKQQYDAVI 301
+EEME + +D+LRR G VT+A +E V+ R + L+ D + EA K+++D ++
Sbjct: 259 SEEMEALNLIDILRRAGANVTVASVEDKLQVVTRRHKFNLIADIMVEEAA--KREFDLIV 316
Query: 302 LPGGLEGSDSLSKSEKVGALLKDH-EDNGKXXXXXXXXXXXXXXHGVARGRRVTSYP 469
+PGGL G+ LS ++ + LLK E N HG+ +G++ TS+P
Sbjct: 317 MPGGLPGAQKLSSTKVLVDLLKKQAESNKPYGAICASPAYVLEPHGLLKGKKATSFP 373
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +3
Query: 528 LVDGNVVTSRGPGTAYWFGLTLIXLLTGKEKADQV 632
+VD N VTS+GP TA + L L+ L GKEK+++V
Sbjct: 172 VVDRNAVTSQGPATAIEYALALVEQLYGKEKSEEV 206
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +3
Query: 528 LVDGNVVTSRGPGTAYWFGLTLIXLLTGKEKA 623
+VDGN++TS+ PG+A F L ++ L G+EKA
Sbjct: 390 VVDGNLITSKAPGSATEFALAIVEKLFGREKA 421
>01_01_0824 +
6411899-6411931,6412001-6412210,6412302-6412451,
6413787-6413969,6417705-6417779,6417959-6418102,
6418233-6418418,6418515-6418694
Length = 386
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = +2
Query: 128 EEMETVITVDMLRRGGVTVTLAGLE-GSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVIL 304
E +E + +D+LRR G VT+A + G V V +V D + +D ++L
Sbjct: 21 EPVEAAVPIDVLRRAGADVTVASADDGELVVEVMYGVRIVADALVAGGDCAAAHFDLIVL 80
Query: 305 PGGLEGSDSLSKSEKVGALLKDH-EDNGKXXXXXXXXXXXXXXHGVARGRRVTSYPSTRD 481
PGG+ G+ +L + A+++ H G G+ G + T++P D
Sbjct: 81 PGGVPGAANLGGCAALEAMVRRHAATGGLYAAICAAPPLALASWGMLNGLKATAHPLFVD 140
Query: 482 K 484
K
Sbjct: 141 K 141
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3
Query: 528 LVDGNVVTSRGPGTAYWFGLTLIXLLTGKEKADQVQKGMLI 650
+VD + VTSRGP T+ F L L+ L K KA+Q+ K ML+
Sbjct: 154 VVDASAVTSRGPATSTEFALALVEQLYSKNKAEQIAKEMLV 194
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +3
Query: 528 LVDGNVVTSRGPGTAYWFGLTLIXLLTGKEKADQVQKGMLIS 653
+VDGNV+TS G GTA F + + L G++ A +V +G+L +
Sbjct: 345 VVDGNVITSGGTGTAMEFAVAAVEKLLGRDVAQRVAEGLLFA 386
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 128 EEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQ-VTLVPDKSLTEALAEKQQYDAVIL 304
EEME + +D+LRR V +A E + + +R + ++ ++ T + KQQ
Sbjct: 227 EEMELITIIDVLRRADADVVVASAENAGVEIVARHGMRIITERLNTFSPRLKQQ------ 280
Query: 305 PGGLEGSDSLSKSEKVGALLK 367
GG G+ ++S +EK+ LLK
Sbjct: 281 -GGTPGAKTMSSNEKLVTLLK 300
>04_04_1546 -
34301905-34302093,34302549-34302911,34303031-34303471,
34304331-34304447,34304540-34304593
Length = 387
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +2
Query: 275 EKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGRR 454
+ YDA+++PGG + L+ ++KV +L+K D K GV +GR+
Sbjct: 270 DASSYDALVIPGG-RAPEYLALNDKVISLVKGFMDKAKPVASICHGQQILSAAGVLQGRK 328
Query: 455 VTSYPSTRDKLSAGDYTY 508
T+YP+ + + G T+
Sbjct: 329 CTAYPAVKLNVVLGGATW 346
>02_01_0558 +
4109929-4110042,4110989-4111097,4111404-4111563,
4111721-4111796,4111984-4112109,4112233-4112484
Length = 278
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 155 DMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPD 250
DM+ RG ++ L L G SP L RQ VPD
Sbjct: 201 DMVARGALSCGLGHLGGLSPALNPRQACRVPD 232
>03_05_0920 - 28812796-28813325,28814019-28816377
Length = 962
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 450 GA*RHTPAPGTSCRPATTRTWRGRGWLVDGNVVTSRGPGTA--YWFGLTLIXLLTGKEKA 623
G R PA G C TR G+L VT R A + FG+ L+ L+TG++
Sbjct: 756 GLVRLAPADG-KCVSVETRLAGTFGYLAPEYAVTGRVTTKADVFSFGVILMELITGRKAL 814
Query: 624 DQVQ 635
D+ Q
Sbjct: 815 DETQ 818
>02_05_0940 -
32934214-32934906,32936049-32936185,32936281-32936416,
32936503-32936886
Length = 449
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 498 TTRTWRGRGWLVDGNVVTSR--GPGTAYWFGLTLIXLLTGKEKADQVQKG 641
TTR G+ ++T Y FG+ L+ LLTG+ D+ ++G
Sbjct: 243 TTRVMGTHGYAAPEYILTGHLTAKSDVYSFGVVLLELLTGRRSVDKRRRG 292
>06_01_0716 -
5207780-5208439,5209238-5209374,5209473-5209608,
5209712-5210059
Length = 426
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 498 TTRTWRGRGWLVDGNVVTSR--GPGTAYWFGLTLIXLLTGKEKADQVQKG 641
TTR G+ ++T Y FG+ L+ LLTG+ D+ ++G
Sbjct: 231 TTRVMGTHGYAAPEYILTGHLTARSDVYSFGVVLLELLTGRRSVDKRRRG 280
>10_05_0019 -
8049145-8049334,8059808-8060618,8060708-8060783,
8060856-8061008
Length = 409
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 581 WFNPHRXADGKGKGRSSPKGNVNLA 655
W NPH+ D G R +G V LA
Sbjct: 122 WANPHKVDDDVGPSRKRTRGQVKLA 146
>01_05_0154 + 18667338-18670110,18670233-18670561,18670914-18670939,
18671678-18671783
Length = 1077
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 564 GTAYWFGLTLIXLLTGKEKADQV 632
G AY FG+TL+ + TGK D +
Sbjct: 936 GDAYSFGITLLEMFTGKAPTDNM 958
>12_02_0045 +
12824766-12825417,12826608-12826753,12826825-12826935,
12827854-12828441
Length = 498
Score = 27.9 bits (59), Expect = 7.5
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +3
Query: 327 TVSPNPRRLVLCLKTTRIMGKSLL---PFVLL------P*RLQPTAWRGAGA*RHTPAPG 479
+++P+PR L L R+ K LL P +LL P R QP++WR AG R P
Sbjct: 7 SLAPSPR---LLLPLRRLDPKPLLRPKPLLLLSTAMGSPARAQPSSWRSAG--RPPPQQQ 61
Query: 480 TSCRPAT 500
SC T
Sbjct: 62 WSCATCT 68
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 593 HRXADGKGKGRSSPKGNVN 649
+R DG GKGR KGN N
Sbjct: 795 NRRPDGNGKGRGKGKGNAN 813
>02_05_0230 +
27029725-27030871,27030995-27031113,27031225-27031349,
27031491-27031590,27031680-27031757,27032818-27032901,
27033077-27033162,27033869-27034049,27034596-27034646
Length = 656
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 173 GVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVI 301
G T+ G GS+ LC+ +V + +AL+ +YD V+
Sbjct: 521 GQTLFCGGFAGSTAALCTTPFDVVKTRVQLQALSPISKYDGVL 563
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,077,536
Number of Sequences: 37544
Number of extensions: 406922
Number of successful extensions: 1331
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -