Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_O09
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80836-12|AAB37889.1|  187|Caenorhabditis elegans Dj-1 (mammalia...    98   6e-21
AF016418-9|AAK18904.1|  186|Caenorhabditis elegans Hypothetical ...    75   6e-14
Z92826-1|CAB07320.1|  263|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AJ271466-1|CAB69047.1|  341|Caenorhabditis elegans fructose-1,6-...    28   6.7  
AC006670-1|AAF39910.1|  341|Caenorhabditis elegans Fructose-1,6-...    28   6.7  
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AF016424-2|AAB65332.1|  720|Caenorhabditis elegans Peroxisome as...    27   8.9  
AB012224-1|BAA76440.1|  720|Caenorhabditis elegans Pex6p homolog...    27   8.9  
AB010968-1|BAA33544.1|  720|Caenorhabditis elegans PEX6 protein.       27   8.9  

>U80836-12|AAB37889.1|  187|Caenorhabditis elegans Dj-1 (mammalian
           transcriptionalregulator) related protein 1.1 protein.
          Length = 187

 Score = 97.9 bits (233), Expect = 6e-21
 Identities = 53/128 (41%), Positives = 75/128 (58%)
 Frame = +2

Query: 125 AEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVIL 304
           AEEME +IT D+L RG + V  AGL+G+ PV C+R   +VPD  L +   E +++D VIL
Sbjct: 15  AEEMEVIITGDVLARGEIRVVYAGLDGAEPVKCARGAHIVPDVKLED--VETEKFDIVIL 72

Query: 305 PGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGRRVTSYPSTRDK 484
           PGG  GS++L++S  V  +LK   ++G               HGV +   VTS+PS ++K
Sbjct: 73  PGGQPGSNTLAESLLVRDVLKSQVESGGLIGAICAAPIALLSHGV-KAELVTSHPSVKEK 131

Query: 485 LSAGDYTY 508
           L  G Y Y
Sbjct: 132 LEKGGYKY 139



 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = +3

Query: 528 LVDGNVVTSRGPGTAYWFGLTLIXLLTGKEKADQVQKGMLI 650
           +V G ++TSRGPGTA+ F L ++ LL GK+KA  +   ML+
Sbjct: 145 VVSGKIITSRGPGTAFEFALKIVELLEGKDKATSLIAPMLL 185


>AF016418-9|AAK18904.1|  186|Caenorhabditis elegans Hypothetical
           protein C49G7.11 protein.
          Length = 186

 Score = 74.5 bits (175), Expect = 6e-14
 Identities = 42/128 (32%), Positives = 68/128 (53%)
 Frame = +2

Query: 125 AEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVIL 304
           AEE+E ++T D+L RGG+ V  AG   + PV C++   +VPD +L +   + + +D +I+
Sbjct: 16  AEEIEVIVTGDVLVRGGLQVLYAG-SSTEPVKCAKGARIVPDVALKD--VKNKTFDIIII 72

Query: 305 PGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGRRVTSYPSTRDK 484
           PGG  G   L++   +G LLK    +G               HG+    RVT + + +DK
Sbjct: 73  PGG-PGCSKLAECPVIGELLKTQVKSGGLIGAICAGPTVLLAHGIV-AERVTCHYTVKDK 130

Query: 485 LSAGDYTY 508
           ++ G Y Y
Sbjct: 131 MTEGGYKY 138



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 15/43 (34%), Positives = 28/43 (65%)
 Frame = +3

Query: 528 LVDGNVVTSRGPGTAYWFGLTLIXLLTGKEKADQVQKGMLISQ 656
           ++   V+TS+GPGTA+ F L ++  L G EK + + K + +++
Sbjct: 144 VISDRVITSKGPGTAFEFALKIVETLEGPEKTNSLLKPLCLAK 186


>Z92826-1|CAB07320.1|  263|Caenorhabditis elegans Hypothetical
           protein C18D11.1 protein.
          Length = 263

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -1

Query: 470 WGMTSRAGPSPRRGLQTLW-EQHKWQQ*FSHY 378
           +G T    P P RG    + EQH+ QQ + HY
Sbjct: 224 YGETHAVAPPPHRGATDYYPEQHRPQQQYGHY 255


>AJ271466-1|CAB69047.1|  341|Caenorhabditis elegans
           fructose-1,6-bisphosphatase protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 125 AEEMETVITVDMLRRGGVTVTLAGLEGSSPVLC 223
           +EE + +I V+  RRG   VT   L+GSS + C
Sbjct: 101 SEENDELIEVEEQRRGKYIVTFDPLDGSSNIDC 133


>AC006670-1|AAF39910.1|  341|Caenorhabditis elegans
           Fructose-1,6-biphosphatase protein1 protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 125 AEEMETVITVDMLRRGGVTVTLAGLEGSSPVLC 223
           +EE + +I V+  RRG   VT   L+GSS + C
Sbjct: 101 SEENDELIEVEEQRRGKYIVTFDPLDGSSNIDC 133


>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical
           protein F54F11.2 protein.
          Length = 1589

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 531 PTTLSPSTYV*SPADSLSLVLGYDVTRRPL 442
           PTT +P+TY     D+L+  L Y +T   L
Sbjct: 267 PTTFAPNTYYLKDFDALNASLTYQITENML 296


>AF016424-2|AAB65332.1|  720|Caenorhabditis elegans Peroxisome
           assembly factor protein6 protein.
          Length = 720

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +1

Query: 61  TYTISKAKTMSKSALVILAQGCRGDG 138
           T   S  KT+SK ALV+L  G  G G
Sbjct: 245 TQIYSAQKTISKKALVLLVTGASGSG 270


>AB012224-1|BAA76440.1|  720|Caenorhabditis elegans Pex6p homolog
           protein.
          Length = 720

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +1

Query: 61  TYTISKAKTMSKSALVILAQGCRGDG 138
           T   S  KT+SK ALV+L  G  G G
Sbjct: 245 TQIYSAQKTISKKALVLLVTGASGSG 270


>AB010968-1|BAA33544.1|  720|Caenorhabditis elegans PEX6 protein.
          Length = 720

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +1

Query: 61  TYTISKAKTMSKSALVILAQGCRGDG 138
           T   S  KT+SK ALV+L  G  G G
Sbjct: 245 TQIYSAQKTISKKALVLLVTGASGSG 270


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,505,060
Number of Sequences: 27780
Number of extensions: 306881
Number of successful extensions: 746
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)