Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_O08
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1453 - 26649922-26650064,26650148-26650244,26651260-266514... 33 0.26
12_01_0785 - 7171224-7171485,7172867-7173310,7175134-7175597 31 1.1
02_04_0622 - 24508508-24508666,24509533-24509634,24510108-245101... 31 1.1
07_01_0775 + 5976883-5978109 30 1.9
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 29 2.5
01_05_0420 + 21969797-21970939,21971307-21971369,21971488-219716... 29 2.5
09_02_0378 - 8146138-8147091 29 4.3
08_01_0079 - 554936-554977,555108-555297,555384-555430,556039-55... 28 5.7
06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089 28 5.7
10_02_0110 - 5371536-5372882 28 7.5
08_02_0703 - 20188489-20190246 28 7.5
05_07_0081 - 27572047-27572925,27573285-27573419 28 7.5
03_06_0691 + 35576319-35576702,35576803-35576885,35576972-355770... 28 7.5
10_05_0052 - 8586577-8588007 27 9.9
10_02_0070 - 4919843-4919913,4921086-4921455 27 9.9
06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221... 27 9.9
01_06_0709 - 31367152-31367532,31367762-31368035,31368474-31370557 27 9.9
>07_03_1453 -
26649922-26650064,26650148-26650244,26651260-26651418,
26651478-26651603
Length = 174
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = -2
Query: 238 PASRSNSFGFSCSRVWPKISGDRILGHNIAKHPTTITSMSIVFRGPNTSSVGILS---CF 68
P + + SF S VWP G ++ +++HP T+ SI+ G GIL C
Sbjct: 83 PPAPTRSFLLSVELVWP---GAVLMNTYLSEHPETVKDHSIIELGSGVGITGILCSRFCK 139
Query: 67 RIVFVPH 47
+V H
Sbjct: 140 EVVLTDH 146
>12_01_0785 - 7171224-7171485,7172867-7173310,7175134-7175597
Length = 389
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +3
Query: 297 CSSAVHLHSGKLSANAAAECRKAVN--ETCGVDIVAFL---KRSDNIGKSSKSLVETMKN 461
CS+++ L LS + R N ETCG ++ + + SD+ KS + ++E +K
Sbjct: 283 CSNSIPLSGSALSHDGPEAPRGMQNGVETCGKPVLTGITPSRCSDHDPKSQRLVIEALKK 342
Query: 462 SNSSCLKENFGVPVMNL 512
+ GVP +NL
Sbjct: 343 VGIDLHLTSNGVPKLNL 359
>02_04_0622 -
24508508-24508666,24509533-24509634,24510108-24510176,
24510294-24510362,24510428-24510502,24510584-24510688,
24511309-24511407,24511521-24513230,24513489-24513788,
24514748-24514846,24514962-24515079,24515166-24515251,
24515334-24515402,24515746-24515843,24516373-24516534,
24516779-24516787,24516970-24516991,24517620-24517712,
24517872-24517940,24518720-24518782,24518882-24519037,
24520895-24521230
Length = 1355
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = +3
Query: 300 SSAVHLHSGKLSANAAAECRKAVNETCGVDIVAFLKRSDNIGKSSKSLVETMKNSNSSCL 479
+S HL SA A + A++ + + L +S IG++++ +E++ +S+ +
Sbjct: 492 ASGTHLAGYSTSAIVAMDKSAAISSESSLSSRSLLSQSKKIGRTAERSIESVLSSSKQKV 551
Query: 480 KENFGVPVMNLGPHIALNSW--TLQDTIKQERPLIRGAGPHPALRERGRA 623
+ + G I L+S ++ +T L+ PH A +ER R+
Sbjct: 552 S---AIESLLKGNSILLDSSLPSINNTRNGGSRLVDTVNPHVANKERSRS 598
>07_01_0775 + 5976883-5978109
Length = 408
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -3
Query: 363 LFYIQLQHLQRAFRYVDG--LLSCKPRLSVPVLPV-QYRTLPHSILPPGRTRSASAAPV 196
L IQ QH F G +++ P P +PV RTL ++ PP ++RS PV
Sbjct: 105 LIRIQAQHAYSRFFAAHGTKIIAMHPASFSPGIPVFDTRTLEMAVYPPPKSRSIICPPV 163
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 309 LLSCKPRLSVPVLPVQYRTLPHSILPPGRTRSASAAPVCGPRSAETGSWATT 154
+ S K + P PV+ R S P G + AP+C P+SA + S + T
Sbjct: 1043 IASAKAKSFAPATPVEDRG---SSSPSGMLSLSERAPICSPQSAPSASASDT 1091
>01_05_0420 +
21969797-21970939,21971307-21971369,21971488-21971616,
21972241-21972291,21972669-21972809,21972922-21973122,
21973201-21973419,21973582-21973700,21973772-21973862,
21975864-21975965,21976291-21976315,21976522-21976592
Length = 784
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +3
Query: 423 GKSSKSLVETMKNSN-SSCLKENFGVPVMNLGPHIALNSWTLQDTIKQERPLIRGAGPHP 599
G + K +V T K+ N + +NFG P G + ++ + E+ + A HP
Sbjct: 572 GNAQKDVVSTEKHKNPTGGPHQNFGRPQPADGKKLGKHNGHRSAPLLDEKDSSKQANLHP 631
Query: 600 ALRERGRAIPPGTAAPS 650
+ ++P A PS
Sbjct: 632 CSEPKKNSLPTTAAVPS 648
>09_02_0378 - 8146138-8147091
Length = 317
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 39 LCTCGTKTIRKHDKMPTEEVLGPRK 113
L CGTKT++ +K PT + G R+
Sbjct: 53 LVQCGTKTVKDSEKEPTSKYRGVRR 77
>08_01_0079 -
554936-554977,555108-555297,555384-555430,556039-556139,
556223-556271,556432-556494,556602-556695,556822-556924,
557719-557791,557872-557984,558068-558149,558386-558913,
559015-559098,560156-560305,561021-561191,561759-561809,
562601-562738,562823-562894,563236-563391,563681-563839,
564080-564180,564577-564829
Length = 939
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = -2
Query: 226 SNSFGFSCSRVWPKISGDRILGHNIAKHPTTITSMSIVFRGPNTSSVGILSC 71
S+S F + ++S D GH IAK P T+T+ V + +TSS+ SC
Sbjct: 467 SSSAPFPVDYMNMEVSSDE--GH-IAKSPDTVTAHESVMKEQDTSSISGHSC 515
>06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089
Length = 681
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 291 RLSVPVLPVQYRTLPHSILPPGRTRSASAAPVCGPRSA 178
RL+V P +R LP + PP ++RS S +PV +A
Sbjct: 22 RLAVGAAP-PFRVLPFFLCPPPQSRSLSFSPVSAVSTA 58
>10_02_0110 - 5371536-5372882
Length = 448
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 105 DPTPPRSAFCRVFVSFSSRTYTA 37
DP P F RV V ++ RTYTA
Sbjct: 218 DPPPSSPTFFRVVVVYNRRTYTA 240
>08_02_0703 - 20188489-20190246
Length = 585
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Frame = -3
Query: 240 ILPPGRTRSASAAPVC-GPRSAETGSWATT*RNIPQQSLV*ALSS-------ADPTPPRS 85
ILPPGRT + C G G+ A T IP +L A+ + A P PP +
Sbjct: 66 ILPPGRTYERACVDACAGLSLCPPGASAATAAAIPNDALRAAIRTWCARHGRAPPAPPSA 125
Query: 84 AFCR 73
A R
Sbjct: 126 AEAR 129
>05_07_0081 - 27572047-27572925,27573285-27573419
Length = 337
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/64 (29%), Positives = 25/64 (39%)
Frame = -3
Query: 315 DGLLSCKPRLSVPVLPVQYRTLPHSILPPGRTRSASAAPVCGPRSAETGSWATT*RNIPQ 136
DGL C P P P PHS L P + + +P+ G + G W R P
Sbjct: 39 DGL-GCSPGPRGPHKPTSNLLPPHSPLLPSQPKPPGHSPMGGEKG--VGRWGKARRRRPP 95
Query: 135 QSLV 124
+V
Sbjct: 96 ADMV 99
>03_06_0691 +
35576319-35576702,35576803-35576885,35576972-35577012,
35577974-35578018,35578217-35578371,35579116-35579265,
35579386-35579481,35579738-35579854,35579969-35580088,
35580170-35580262,35580351-35580467,35580815-35580931,
35581089-35581151,35581238-35581399
Length = 580
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 333 RAFRYVDGLLSCKPRLSVPVLPVQYRT 253
+ ++ VDG+L+C P + +PV Y T
Sbjct: 318 QVWKDVDGVLTCDPNICANAIPVPYLT 344
>10_05_0052 - 8586577-8588007
Length = 476
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 111 SADPTPPRSAFCRVFVSFSSRTYTA 37
SADP PP A R+ V + R++TA
Sbjct: 219 SADPLPPGPAAFRLVVLYKRRSFTA 243
>10_02_0070 - 4919843-4919913,4921086-4921455
Length = 146
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 282 VPVLPVQYRTLPHSILPPGRTRSASAAPVCGPR 184
+ + ++ R+ + PPG+TRS SA+ C R
Sbjct: 55 IDIPAIEARSQAKGMFPPGQTRSRSASRTCCSR 87
>06_03_0191 - 17720512-17721435,17721718-17721843,17721940-17722140,
17722189-17722332,17722415-17722722,17723433-17723568,
17723748-17723841,17723976-17724073,17724951-17725004,
17725704-17726150,17726227-17726393,17726540-17726663,
17726751-17726837,17727000-17727056,17727492-17727560,
17727664-17727811,17727893-17728116,17728842-17728958,
17729649-17729742,17730573-17730640,17733278-17733334,
17733412-17733511,17733638-17733674,17734077-17734200,
17735254-17735322,17735371-17735410,17735905-17735993,
17736849-17736953,17737033-17737104,17737814-17737936,
17738049-17738117,17738966-17739059,17739145-17739231,
17740184-17740351,17740436-17740552,17741484-17741590,
17741671-17741803,17742564-17742667,17743504-17743629,
17744148-17744216,17744996-17745064,17745278-17745358,
17745444-17745533,17745896-17746000,17747803-17747873,
17748320-17748461,17749266-17749330,17750081-17750168,
17750236-17750325,17750437-17750673,17751064-17751170,
17751625-17751832,17752376-17752546
Length = 2366
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +3
Query: 177 PLILGHTREQLKPNEFDREAGCCEVMFGTELAVLELINEVCSSAVHLHSGKLSANAAAEC 356
P++ + +E+ +P + E CEV G ++++ + CS+ + + K+S +
Sbjct: 1792 PIMKKYLQERAEPGD---ECANCEVALGALVSLVAYLCTQCSNRISMLDNKISDSYKLLA 1848
Query: 357 RKAVNETCGVDIVAFLKRSDNIGKSSKSLV--ETMKNSNSSC 476
+ + C + +A K D IG ++ E M S C
Sbjct: 1849 K--ILYFCLGEAIALAKLVDEIGYHGENCTSNELMSGSFRHC 1888
>01_06_0709 - 31367152-31367532,31367762-31368035,31368474-31370557
Length = 912
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 87 TEEVLGPRKTMLILVIVVGCFAMLWPRI-LSPLILGHTREQL 209
T EV GP+K+ML++ +GC L I ++P + T E L
Sbjct: 497 TSEVNGPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAL 538
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,449,723
Number of Sequences: 37544
Number of extensions: 428816
Number of successful extensions: 1431
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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