Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_O07
(615 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83231-1|CAB05749.1| 357|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p... 29 2.0
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ... 29 2.0
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ... 29 2.0
AC006776-7|AAF60623.1| 361|Caenorhabditis elegans Serpentine re... 29 2.0
Z82276-8|CAL69741.1| 281|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z79601-5|CAB01882.1| 450|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81030-13|CAB02705.2| 358|Caenorhabditis elegans Hypothetical p... 27 8.1
AC024831-2|AAN63422.1| 502|Caenorhabditis elegans Hypothetical ... 27 8.1
AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z83231-1|CAB05749.1| 357|Caenorhabditis elegans Hypothetical
protein F57G9.1 protein.
Length = 357
Score = 30.7 bits (66), Expect = 0.86
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 344 YIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLNKLLLRYNLRSFL 487
Y P NLKL++ +L IL + N+ IY ++K+ L + FL
Sbjct: 17 YFYNEPLNLKLVISIFELLSYILCGYILNLSIYVMSKIQLFHKNLMFL 64
>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 338 YPYIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLN 451
+P +Y F ++ ++ +ILGF V +MG ++ N
Sbjct: 940 WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977
>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 338 YPYIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLN 451
+P +Y F ++ ++ +ILGF V +MG ++ N
Sbjct: 940 WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977
>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 338 YPYIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLN 451
+P +Y F ++ ++ +ILGF V +MG ++ N
Sbjct: 940 WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977
>AC006776-7|AAF60623.1| 361|Caenorhabditis elegans Serpentine
receptor, class w protein100 protein.
Length = 361
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 131 LIVFILFYLSTGLTVFYTFRLII 199
L+ ILF+LS L+VFY FR ++
Sbjct: 147 LMAVILFFLSALLSVFYQFRFVV 169
>Z82276-8|CAL69741.1| 281|Caenorhabditis elegans Hypothetical
protein K03D3.14 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.6
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +2
Query: 338 YPYIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPN-- 511
Y Y IY PF SILGL+ G ++ M I+S+ LL + + + + ++ +
Sbjct: 144 YQYKIYNPF---------SILGLVYGIIIFCMAIFSVLSALLHFPIVKKIRALTYLDSTQ 194
Query: 512 LSTYGLSYIYLNFRQILFKNIXI 580
LST +L ++FK I I
Sbjct: 195 LSTLYTYIFWLTIFIVVFKVIYI 217
>Z79601-5|CAB01882.1| 450|Caenorhabditis elegans Hypothetical
protein K09A9.3 protein.
Length = 450
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 101 LEMVSFNSFNLIVFILFYLSTGLTVFYTFRLIIYVIINDFN 223
L +V+ ++FI ST LT F+T +I +++N N
Sbjct: 126 LSIVAVCVITTMIFIYVETSTWLTGFFTLTIITIIVLNGAN 166
>Z81030-13|CAB02705.2| 358|Caenorhabditis elegans Hypothetical
protein C01G10.3 protein.
Length = 358
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 131 LIVFILFYLSTGLTVFYTFRLIIYVIINDFNL-IIIYNLYDEDYIMLNRIF 280
L+V I Y+ L F + + II F + +++YN + Y+ +NR F
Sbjct: 71 LVVMIGVYVPESLIGFSIYPRSVESIIIIFGMNLLVYNEFQSVYLSINRFF 121
>AC024831-2|AAN63422.1| 502|Caenorhabditis elegans Hypothetical
protein Y55F3C.7b protein.
Length = 502
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 104 EMVSFNSFNLIVFILFYLSTGLTVFYTFRLIIYVII 211
E VS N FNL+ ++ +L+ V +T +++ +++
Sbjct: 327 ECVSVNEFNLLYYLCIFLAVCSIVGFTMNIVLALML 362
>AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical
protein Y55F3C.7a protein.
Length = 500
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 104 EMVSFNSFNLIVFILFYLSTGLTVFYTFRLIIYVII 211
E VS N FNL+ ++ +L+ V +T +++ +++
Sbjct: 327 ECVSVNEFNLLYYLCIFLAVCSIVGFTMNIVLALML 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,597,986
Number of Sequences: 27780
Number of extensions: 90893
Number of successful extensions: 349
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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