Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_N19
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 94 1e-20
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ... 42 8e-05
SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|... 27 3.1
SPCC126.10 |iah1||isoamyl acetate hydrolytic enzyme Iah1 |Schizo... 26 5.5
SPAC1556.08c ||SPAC1F12.01c|protein kinase activator Snf4 |Schiz... 25 7.2
SPCC11E10.06c |||RNA polymerase II elongator complex subunit Elp... 25 9.5
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 25 9.5
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 9.5
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 94.3 bits (224), Expect = 1e-20
Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +2
Query: 140 TKDALLPGIFFALL-VRWCVAAYPYSGYRKPPMYGDFEAQRHWQEITVHTPVTTWYHNTT 316
+K P + +L+ ++W ++ PYSGY PPMYGDFEAQRHW E+T+HTPV+ WY
Sbjct: 23 SKFLFFPCLIMSLVFMQWLISIGPYSGYNTPPMYGDFEAQRHWMELTLHTPVSQWYF--- 79
Query: 317 QNDLEYWGMDYPP 355
DL++WG+DYPP
Sbjct: 80 -RDLQWWGLDYPP 91
Score = 44.0 bits (99), Expect = 2e-05
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 LSAYHSLLMGLVADWL-DPESVRLFASRGYEDDSHKTFMRWTVFLSDLYFYATAVLCICI 533
L+AY S G++ + +PE SRG+E K FMR TV S L ++
Sbjct: 92 LTAYVSWFFGIIGHYFFNPEWFADVTSRGFESLELKLFMRSTVIASHLLILVPPLMFYSK 151
Query: 534 DAERVRAKETKWVFKRTDLSTILFLLYPGLILIDHGHF 647
R + +V + L +LF P L+LIDHGHF
Sbjct: 152 WWSR---RIPNFVDRNASLIMVLF--QPALLLIDHGHF 184
>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 41.9 bits (94), Expect = 8e-05
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 164 IFFALLVRWCVAAYPYSGYRKPPMYGDFEAQRHWQEITVHTPVTTWYHNTTQNDLEYWGM 343
++ A + V + + YR DFE R+W IT P++ WY ++ + W +
Sbjct: 7 LYNAAIASTFVKVFLFPSYRST----DFEVHRNWLAITHSLPISEWY----KSSISEWTL 58
Query: 344 DYPPFIS 364
DYPPF +
Sbjct: 59 DYPPFFA 65
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 588 LSTILFLLYPGLILIDHGHF 647
L+ I L PGL++IDH HF
Sbjct: 133 LTAIDIFLSPGLLIIDHIHF 152
>SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 440
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 350 DSPCPNIQGHFASCYDTTLLPVCEQ*SLANVSELRSLHTSVVYD 219
DS C N +F CYD LP+ L + SEL ++ ++D
Sbjct: 86 DSFCNNALQNFKLCYDDETLPLWMVYVLNDKSELVFIYDHSLFD 129
>SPCC126.10 |iah1||isoamyl acetate hydrolytic enzyme Iah1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 246
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 493 ICISMRQQSYVYA*TRNV*ELKKQNGCSRGLI--YQLSCFYCT 615
IC Q+ YV A + V L K S GLI Y+++ Y T
Sbjct: 152 ICFKREQEPYVIAASETVNTLNKSKANSAGLINLYEITKSYPT 194
>SPAC1556.08c ||SPAC1F12.01c|protein kinase activator Snf4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 334
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 180 LFVGVLPHIRILDIVNHRCMETSKLR 257
+ V VL RIL ++ C ET+ LR
Sbjct: 156 MIVSVLTQYRILKFISMNCKETAMLR 181
>SPCC11E10.06c |||RNA polymerase II elongator complex subunit Elp4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 361
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 465 FMRWTVFLSDLYFYATAV--LCICIDAERVRAKETKWVFKRTDLSTILFLLYP 617
F+R+ LS L T+V +C+C + +++ + +F +L++ +F L+P
Sbjct: 225 FIRFIHTLSSLIKCTTSVHLICMCSVPSTLFSRDCEQIFWLENLASAVFSLHP 277
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -1
Query: 252 ASKSPYIGGLRYPEYGYA-ATHQRT--SNAKNIPGKSASFV 139
+SK P +GG+ +YG+A T QR SNA+ + K+ +
Sbjct: 806 SSKVPLLGGVTNVDYGWARCTGQRAQKSNAQLLKTKTDKII 846
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 131 TYLDRLFSSLSRLNKFFSRF*MIYIQ 54
TYL++ SSL + N+ FS F ++ Q
Sbjct: 1713 TYLNQNVSSLEKCNQIFSIFYEVFFQ 1738
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,836,168
Number of Sequences: 5004
Number of extensions: 61778
Number of successful extensions: 163
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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