Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_M19
(520 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY102656-1|AAM27485.1| 236|Drosophila melanogaster GH04183p pro... 145 3e-35
AY071444-1|AAL49066.1| 144|Drosophila melanogaster RE52852p pro... 145 3e-35
AE014296-606|AAN11547.1| 144|Drosophila melanogaster CG12740-PD... 145 3e-35
AE014296-605|AAF47742.1| 144|Drosophila melanogaster CG12740-PB... 145 3e-35
AE014296-604|AAN11546.1| 144|Drosophila melanogaster CG12740-PA... 145 3e-35
AE014296-607|AAF47743.1| 165|Drosophila melanogaster CG12740-PC... 117 8e-27
AY070613-1|AAL48084.1| 995|Drosophila melanogaster RE71565p pro... 30 2.2
AE013599-2173|AAF58067.2| 995|Drosophila melanogaster CG8414-PA... 30 2.2
>AY102656-1|AAM27485.1| 236|Drosophila melanogaster GH04183p
protein.
Length = 236
Score = 145 bits (352), Expect = 3e-35
Identities = 69/123 (56%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
Frame = +2
Query: 119 LXKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPA 298
L KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D+KGFT V KK K ++PA
Sbjct: 111 LLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKGFTAVLKKGKYAQRPA 170
Query: 299 KNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQR--PIKAKKAKDS 472
KN +R FKAG RRSL K+K LL + YR DL +A LRRASA+LRSQ+ P+K KKA+ +
Sbjct: 171 KNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLRSQKPAPVKGKKAEFA 230
Query: 473 RNQ 481
+ +
Sbjct: 231 KGK 233
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 73 SSSLNWMIIRNNNAFLXEEAQYQK 144
SS LNW+IIRNNNAFL ++ +K
Sbjct: 96 SSHLNWLIIRNNNAFLLKKRDVKK 119
>AY071444-1|AAL49066.1| 144|Drosophila melanogaster RE52852p
protein.
Length = 144
Score = 145 bits (352), Expect = 3e-35
Identities = 69/123 (56%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
Frame = +2
Query: 119 LXKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPA 298
L KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D+KGFT V KK K ++PA
Sbjct: 19 LLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKGFTAVLKKGKYAQRPA 78
Query: 299 KNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQR--PIKAKKAKDS 472
KN +R FKAG RRSL K+K LL + YR DL +A LRRASA+LRSQ+ P+K KKA+ +
Sbjct: 79 KNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLRSQKPAPVKGKKAEFA 138
Query: 473 RNQ 481
+ +
Sbjct: 139 KGK 141
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 73 SSSLNWMIIRNNNAFLXEEAQYQK 144
SS LNW+IIRNNNAFL ++ +K
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKK 27
>AE014296-606|AAN11547.1| 144|Drosophila melanogaster CG12740-PD,
isoform D protein.
Length = 144
Score = 145 bits (352), Expect = 3e-35
Identities = 69/123 (56%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
Frame = +2
Query: 119 LXKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPA 298
L KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D+KGFT V KK K ++PA
Sbjct: 19 LLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKGFTAVLKKGKYAQRPA 78
Query: 299 KNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQR--PIKAKKAKDS 472
KN +R FKAG RRSL K+K LL + YR DL +A LRRASA+LRSQ+ P+K KKA+ +
Sbjct: 79 KNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLRSQKPAPVKGKKAEFA 138
Query: 473 RNQ 481
+ +
Sbjct: 139 KGK 141
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 73 SSSLNWMIIRNNNAFLXEEAQYQK 144
SS LNW+IIRNNNAFL ++ +K
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKK 27
>AE014296-605|AAF47742.1| 144|Drosophila melanogaster CG12740-PB,
isoform B protein.
Length = 144
Score = 145 bits (352), Expect = 3e-35
Identities = 69/123 (56%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
Frame = +2
Query: 119 LXKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPA 298
L KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D+KGFT V KK K ++PA
Sbjct: 19 LLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKGFTAVLKKGKYAQRPA 78
Query: 299 KNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQR--PIKAKKAKDS 472
KN +R FKAG RRSL K+K LL + YR DL +A LRRASA+LRSQ+ P+K KKA+ +
Sbjct: 79 KNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLRSQKPAPVKGKKAEFA 138
Query: 473 RNQ 481
+ +
Sbjct: 139 KGK 141
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 73 SSSLNWMIIRNNNAFLXEEAQYQK 144
SS LNW+IIRNNNAFL ++ +K
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKK 27
>AE014296-604|AAN11546.1| 144|Drosophila melanogaster CG12740-PA,
isoform A protein.
Length = 144
Score = 145 bits (352), Expect = 3e-35
Identities = 69/123 (56%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
Frame = +2
Query: 119 LXKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPA 298
L KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D+KGFT V KK K ++PA
Sbjct: 19 LLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKGFTAVLKKGKYAQRPA 78
Query: 299 KNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQR--PIKAKKAKDS 472
KN +R FKAG RRSL K+K LL + YR DL +A LRRASA+LRSQ+ P+K KKA+ +
Sbjct: 79 KNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLRSQKPAPVKGKKAEFA 138
Query: 473 RNQ 481
+ +
Sbjct: 139 KGK 141
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 73 SSSLNWMIIRNNNAFLXEEAQYQK 144
SS LNW+IIRNNNAFL ++ +K
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKK 27
>AE014296-607|AAF47743.1| 165|Drosophila melanogaster CG12740-PC,
isoform C protein.
Length = 165
Score = 117 bits (282), Expect = 8e-27
Identities = 53/97 (54%), Positives = 71/97 (73%)
Frame = +2
Query: 119 LXKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPA 298
L KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D+KGFT V KK K ++PA
Sbjct: 19 LLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKGFTAVLKKGKYAQRPA 78
Query: 299 KNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATL 409
KN +R FKAG RRSL K+K LL + YR DL + +
Sbjct: 79 KNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQVIM 115
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 73 SSSLNWMIIRNNNAFLXEEAQYQK 144
SS LNW+IIRNNNAFL ++ +K
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKK 27
>AY070613-1|AAL48084.1| 995|Drosophila melanogaster RE71565p
protein.
Length = 995
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 110 MHSLXKKRNIKKPFSKEP--NNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKA 283
M S K + K +K P NNV+N S + K +NP K V KK+ A
Sbjct: 64 MESPKKSKKNKTAGAKRPLSNNVSNPDSSPSQKRLKKDNTLPKKNPVNKSSNVAAKKSAA 123
Query: 284 TRKPAK 301
T K AK
Sbjct: 124 TSKSAK 129
>AE013599-2173|AAF58067.2| 995|Drosophila melanogaster CG8414-PA
protein.
Length = 995
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 110 MHSLXKKRNIKKPFSKEP--NNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKA 283
M S K + K +K P NNV+N S + K +NP K V KK+ A
Sbjct: 64 MESPKKSKKNKTAGAKRPLSNNVSNPDSSPSQKRLKKDNTLPKKNPVNKSSNVAAKKSAA 123
Query: 284 TRKPAK 301
T K AK
Sbjct: 124 TSKSAK 129
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,176,183
Number of Sequences: 53049
Number of extensions: 479566
Number of successful extensions: 917
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -