Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_L19
(523 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0409 - 20503480-20503678,20504522-20504717,20504805-205048... 154 5e-38
01_01_0745 + 5769150-5769152,5769268-5769375,5769812-5769854,576... 154 5e-38
02_02_0195 + 7676014-7676094,7676111-7676218,7676307-7676349,767... 110 8e-25
05_02_0095 + 6564703-6564705,6564848-6564955,6565153-6565195,656... 91 7e-19
02_02_0196 + 7685933-7685961,7686086-7686284 48 6e-06
11_04_0418 - 17443989-17444082,17445153-17445406,17445709-174457... 33 0.18
06_03_1403 + 29923503-29923821,29924269-29924405,29924495-299246... 32 0.32
08_02_0286 - 15326876-15328135 28 4.0
01_06_0514 + 29955129-29955796,29955903-29956023 28 4.0
05_04_0266 - 19558769-19559275,19560852-19560933,19561354-195618... 27 6.9
02_04_0004 - 18837526-18837639,18838161-18838262,18838338-188385... 27 6.9
09_02_0595 - 11051728-11051955,11052032-11052127,11052134-11052739 27 9.1
05_07_0327 - 29275916-29276017,29276101-29276283,29276392-292764... 27 9.1
>06_03_0409 -
20503480-20503678,20504522-20504717,20504805-20504847,
20505632-20505739,20505848-20505850
Length = 182
Score = 154 bits (373), Expect = 5e-38
Identities = 73/97 (75%), Positives = 80/97 (82%)
Frame = +1
Query: 220 FPRPRYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGI 399
F + RYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGI
Sbjct: 49 FSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGI 108
Query: 400 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRRR 510
QEHIDLGIKYDPS GIYG+DFYVVL R G+ V RRR
Sbjct: 109 QEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRR 145
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = +3
Query: 99 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA 230
N MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKA
Sbjct: 9 NPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKA 52
>01_01_0745 +
5769150-5769152,5769268-5769375,5769812-5769854,
5769945-5770140,5770836-5771034
Length = 182
Score = 154 bits (373), Expect = 5e-38
Identities = 73/97 (75%), Positives = 80/97 (82%)
Frame = +1
Query: 220 FPRPRYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGI 399
F + RYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGI
Sbjct: 49 FSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGI 108
Query: 400 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRRR 510
QEHIDLGIKYDPS GIYG+DFYVVL R G+ V RRR
Sbjct: 109 QEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRR 145
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = +3
Query: 99 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA 230
N MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKA
Sbjct: 9 NPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKA 52
>02_02_0195 +
7676014-7676094,7676111-7676218,7676307-7676349,
7676449-7676648
Length = 143
Score = 110 bits (264), Expect = 8e-25
Identities = 53/69 (76%), Positives = 58/69 (84%)
Frame = +1
Query: 220 FPRPRYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGI 399
F + RYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGI
Sbjct: 75 FSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI 134
Query: 400 QEHIDLGIK 426
QEHIDLGIK
Sbjct: 135 QEHIDLGIK 143
Score = 69.7 bits (163), Expect = 1e-12
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = +3
Query: 99 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA 230
N MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKA
Sbjct: 35 NPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKA 78
>05_02_0095 +
6564703-6564705,6564848-6564955,6565153-6565195,
6565303-6565409,6566310-6566395,6566396-6566594
Length = 181
Score = 90.6 bits (215), Expect = 7e-19
Identities = 52/99 (52%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Frame = +1
Query: 220 FPRPRYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNF--SATGNFGF 393
F + RYTVRSFGIRRNEKIA + TVRG KA ++LE GLK+ DN S T +
Sbjct: 49 FSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKIIRIV---DNLIPSVTRSTRA 105
Query: 394 GIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRRR 510
+ +YDPS GIYG+DFYVVL R G+ V RRR
Sbjct: 106 KRINLSNQCFRYDPSTGIYGMDFYVVLERAGYRVARRRR 144
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = +3
Query: 99 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA 230
N MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKA
Sbjct: 9 NPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKA 52
>02_02_0196 + 7685933-7685961,7686086-7686284
Length = 75
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1
Query: 427 YDPSIGIYGLDFYVVLGRPGFNVXHRRR 510
YDPS GIYG+DFYVVL R G+ V RRR
Sbjct: 11 YDPSTGIYGMDFYVVLERAGYRVARRRR 38
>11_04_0418 -
17443989-17444082,17445153-17445406,17445709-17445783,
17446156-17446377,17446789-17446941,17447031-17447167,
17447615-17447933
Length = 417
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 268 EKIAVHCTVRGAKAEEILERGLK 336
EKIA + TVRG KA ++LE GLK
Sbjct: 280 EKIACYVTVRGEKAMQLLESGLK 302
>06_03_1403 +
29923503-29923821,29924269-29924405,29924495-29924647,
29924690-29925280,29925523-29925597,29925901-29926169,
29927238-29927331
Length = 545
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 268 EKIAVHCTVRGAKAEEILERGLK 336
EKIA + TVRG KA ++LE GLK
Sbjct: 403 EKIACYVTVRGEKAMQLLEIGLK 425
>08_02_0286 - 15326876-15328135
Length = 419
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 262 RNEKIAVHCTVR-GAKAEEILERGLKVREYELRR 360
R +++ V C V A A+E+L RG + + ELRR
Sbjct: 147 RGDRLVVECAVLLAADADEVLRRGPRPLDDELRR 180
>01_06_0514 + 29955129-29955796,29955903-29956023
Length = 262
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -3
Query: 383 LPVAEKLSRRNSYSL-TFKPLSRISSALAPRTVQWTAIFSLRRIPKDRTVYLGLGKYRLL 207
L V + + R + S+ T +P+ + S LA V + + +R+ +DR +Y+ LG+
Sbjct: 171 LEVCKGVPRSSKKSIFTIEPIGELPSTLAC-AVSRSCCYCRKRLQQDRDIYMYLGEKAFC 229
Query: 206 SCE 198
S E
Sbjct: 230 SNE 232
>05_04_0266 -
19558769-19559275,19560852-19560933,19561354-19561865,
19563113-19563124
Length = 370
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 327 PLKDFFCFSSSDCTMDSNLFITTDTKRPHCIPRP 226
P K +FC DC+ + I DT R I RP
Sbjct: 40 PAKPWFCSKKRDCSCEHPEDIQYDTSRIWAIDRP 73
>02_04_0004 -
18837526-18837639,18838161-18838262,18838338-18838536,
18838610-18838910,18839359-18839404,18839494-18839652,
18839747-18840583,18840719-18840766
Length = 601
Score = 27.5 bits (58), Expect = 6.9
Identities = 22/90 (24%), Positives = 42/90 (46%)
Frame = +2
Query: 230 LGIQCGLLVSVVMKRLLSIVQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNT 409
LGI CG K++L +++E K + + + ++ + G+T + + IL F T
Sbjct: 157 LGIPCG------RKQILPAIKNEVKDVKAYMCEIFEKDSFD-GITIATIQRILEKKFTRT 209
Query: 410 LTWVSSTIPQLEFMDWTFTSYLAGQVSTXH 499
+T + + F+ + T +LA Q H
Sbjct: 210 MTVHEQIVFKTAFIIFVVTKFLAPQSVNNH 239
>09_02_0595 - 11051728-11051955,11052032-11052127,11052134-11052739
Length = 309
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -1
Query: 280 QQSFHYDGYQKTALYT*ALENTGCCPVSCSNTLAARVSLSPDSPTQMFKQSFL 122
++SF Y K L A+ G C + TL L+P P K F+
Sbjct: 81 KESFRYPTEAKVGLKRQAIRKMGNCWKNFKTTLVTEYVLNPAQPEPFVKYPFI 133
>05_07_0327 -
29275916-29276017,29276101-29276283,29276392-29276453,
29276590-29276671,29276922-29276987,29277297-29277359,
29277466-29277570,29277678-29277887,29277988-29278103,
29278875-29279082
Length = 398
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = -2
Query: 432 IVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFFCFSSSDCTMDSN 274
++LD+++ +FL + E++ QF++ D+ K + + +S TMD N
Sbjct: 166 LLLDSRI-IFLGMPI-VPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDEN 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,850,762
Number of Sequences: 37544
Number of extensions: 281979
Number of successful extensions: 718
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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