Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_L19
(523 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 191 1e-48
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 191 1e-48
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 191 1e-48
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 191 1e-48
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 191 1e-48
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 191 1e-48
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 191 1e-48
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 184 2e-46
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 167 2e-41
AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11 p... 75 2e-13
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 30 5.7
AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens ... 30 5.7
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 30 5.7
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 30 5.7
AK092089-1|BAC03802.1| 403|Homo sapiens protein ( Homo sapiens ... 29 7.5
AB231764-1|BAE17137.1| 1963|Homo sapiens hypothetical protein pr... 29 7.5
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 191 bits (465), Expect = 1e-48
Identities = 86/100 (86%), Positives = 95/100 (95%)
Frame = +1
Query: 220 FPRPRYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGI 399
F + RYTVRSFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGI
Sbjct: 50 FSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGI 109
Query: 400 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRRRKTG 519
QEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++ ++R+TG
Sbjct: 110 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTG 149
Score = 84.2 bits (199), Expect = 2e-16
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3
Query: 96 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA 230
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKA
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKA 53
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 191 bits (465), Expect = 1e-48
Identities = 86/100 (86%), Positives = 95/100 (95%)
Frame = +1
Query: 220 FPRPRYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGI 399
F + RYTVRSFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGI
Sbjct: 49 FSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGI 108
Query: 400 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRRRKTG 519
QEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++ ++R+TG
Sbjct: 109 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTG 148
Score = 84.2 bits (199), Expect = 2e-16
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3
Query: 96 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA 230
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKA
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKA 52
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 191 bits (465), Expect = 1e-48
Identities = 86/100 (86%), Positives = 95/100 (95%)
Frame = +1
Query: 220 FPRPRYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGI 399
F + RYTVRSFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGI
Sbjct: 49 FSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGI 108
Query: 400 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRRRKTG 519
QEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++ ++R+TG
Sbjct: 109 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTG 148
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = +3
Query: 96 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA 230
+N MR L IRKLCLNICVGESGDRL RAAKVLEQLTGQ PVFSKA
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLARAAKVLEQLTGQTPVFSKA 52
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 191 bits (465), Expect = 1e-48
Identities = 86/100 (86%), Positives = 95/100 (95%)
Frame = +1
Query: 220 FPRPRYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGI 399
F + RYTVRSFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGI
Sbjct: 48 FSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGI 107
Query: 400 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRRRKTG 519
QEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++ ++R+TG
Sbjct: 108 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTG 147
Score = 84.2 bits (199), Expect = 2e-16
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3
Query: 96 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA 230
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKA
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKA 51
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 191 bits (465), Expect = 1e-48
Identities = 86/100 (86%), Positives = 95/100 (95%)
Frame = +1
Query: 220 FPRPRYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGI 399
F + RYTVRSFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGI
Sbjct: 50 FSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGI 109
Query: 400 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRRRKTG 519
QEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++ ++R+TG
Sbjct: 110 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTG 149
Score = 84.2 bits (199), Expect = 2e-16
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3
Query: 96 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA 230
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKA
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKA 53
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 191 bits (465), Expect = 1e-48
Identities = 86/100 (86%), Positives = 95/100 (95%)
Frame = +1
Query: 220 FPRPRYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGI 399
F + RYTVRSFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGI
Sbjct: 48 FSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGI 107
Query: 400 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRRRKTG 519
QEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++ ++R+TG
Sbjct: 108 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTG 147
Score = 84.2 bits (199), Expect = 2e-16
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3
Query: 96 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA 230
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKA
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKA 51
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 191 bits (465), Expect = 1e-48
Identities = 86/100 (86%), Positives = 95/100 (95%)
Frame = +1
Query: 220 FPRPRYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGI 399
F + RYTVRSFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGI
Sbjct: 49 FSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGI 108
Query: 400 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRRRKTG 519
QEHIDLGIKYDPSIGIYGLDFYVVLGRPGF++ ++R+TG
Sbjct: 109 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTG 148
Score = 84.2 bits (199), Expect = 2e-16
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3
Query: 96 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA 230
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKA
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKA 52
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 184 bits (448), Expect = 2e-46
Identities = 83/100 (83%), Positives = 93/100 (93%)
Frame = +1
Query: 220 FPRPRYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGI 399
F + RYTVRSFGIRRNEKIAVHC VRGAKAEEILE+GLKVRE ELR++NFS TGNFGFGI
Sbjct: 50 FSKARYTVRSFGIRRNEKIAVHCAVRGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGI 109
Query: 400 QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRRRKTG 519
QEHIDLGI+YDPSIGIYGLDFYVVLGRPGF++ ++R+TG
Sbjct: 110 QEHIDLGIEYDPSIGIYGLDFYVVLGRPGFSIADKKRRTG 149
Score = 81.4 bits (192), Expect = 2e-15
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = +3
Query: 96 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA 230
+N MR L IRKLCLNICVGESG RLTRAAKVLEQLTGQ PVFSKA
Sbjct: 9 ENPMRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKA 53
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 167 bits (406), Expect = 2e-41
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 220 FPRPRYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGI 399
F + RYTVRSFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGI
Sbjct: 48 FSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGI 107
Query: 400 QEHIDLGIKYDPSIGIYGLDFYVV 471
QEHIDLGIKYDPSIGIYGLDFYVV
Sbjct: 108 QEHIDLGIKYDPSIGIYGLDFYVV 131
Score = 84.2 bits (199), Expect = 2e-16
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3
Query: 96 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA 230
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKA
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKA 51
>AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11
protein.
Length = 36
Score = 74.9 bits (176), Expect = 2e-13
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +3
Query: 120 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSK 227
IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSK
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 434 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 285
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1737 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1786
>AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ44499 fis, clone UTERU3000665, highly similar
to Homo sapiens Snf2-related CBP activator protein
(SRCAP). ).
Length = 559
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 434 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 285
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 386 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 435
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 434 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 285
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1478 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1527
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 434 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 285
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1560 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1609
>AK092089-1|BAC03802.1| 403|Homo sapiens protein ( Homo sapiens
cDNA FLJ34770 fis, clone NT2NE2002870. ).
Length = 403
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +1
Query: 148 LVNPVTG*LVPPRCWSNSQDNSLYFPRPRYTVRSFGIRRNEKIAVHC 288
+ P T LV R W + D +L+ PR +R + A+ C
Sbjct: 52 IAKPPTCVLVRVRWWGETSDGTLFCPRDALQTEPKAVRTTTRYAIRC 98
>AB231764-1|BAE17137.1| 1963|Homo sapiens hypothetical protein
protein.
Length = 1963
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +1
Query: 148 LVNPVTG*LVPPRCWSNSQDNSLYFPRPRYTVRSFGIRRNEKIAVHC 288
+ P T LV R W + D +L+ PR +R + A+ C
Sbjct: 52 IAKPPTCVLVRVRWWGETSDGTLFCPRDALQTEPKAVRTTTRYAIRC 98
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,189,938
Number of Sequences: 237096
Number of extensions: 1553956
Number of successful extensions: 10886
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10886
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -