BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_L13
(555 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY313948-1|AAP76391.1| 424|Anopheles gambiae cytochrome P450 CY... 25 2.2
DQ974164-1|ABJ52804.1| 410|Anopheles gambiae serpin 4C protein. 23 5.1
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 6.7
DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide... 23 6.7
CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein... 23 8.9
AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein. 23 8.9
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 23 8.9
>AY313948-1|AAP76391.1| 424|Anopheles gambiae cytochrome P450
CYP6M4 protein.
Length = 424
Score = 24.6 bits (51), Expect = 2.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 353 KKMFSDVGRKVFNSVLMNPAPSFSRRVDLALRSPQYKDF 469
KK+F R +LMN PS ++ V + L P+ DF
Sbjct: 150 KKIFGR-SRSNLQLLLMNAFPSVAKLVGIKLILPEVSDF 187
>DQ974164-1|ABJ52804.1| 410|Anopheles gambiae serpin 4C protein.
Length = 410
Score = 23.4 bits (48), Expect = 5.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 259 YNSTTAVCRFQSFQPRRHIEIYT 191
Y T VC +SF+ RR + +T
Sbjct: 316 YGGKTCVCCIESFRRRRRRDAFT 338
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 23.0 bits (47), Expect = 6.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 286 HSSFLCYTYYNSTTAVCRFQSF 221
++SF C + + AVC F SF
Sbjct: 365 NNSFHCSNFISLDEAVCSFSSF 386
>DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide F
receptor protein.
Length = 575
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 291 TRTHRFFVTLTITQLQLCVGFNPFNP 214
T T+ F L ++ + LCV PF P
Sbjct: 128 TVTNLFITNLALSDILLCVLAVPFTP 153
>CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein
protein.
Length = 420
Score = 22.6 bits (46), Expect = 8.9
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 311 SWQARDACCGGTTSKKMFSDVGRKVFNSVLMNPAPSFSRRVDLALRSPQY 460
+WQ R GT+S+ + S V R F + P F+ L + P +
Sbjct: 9 TWQQRSFPSTGTSSQSVVSIVLRVPFPANRFQPDDIFTMEQFLKISHPPH 58
>AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein.
Length = 420
Score = 22.6 bits (46), Expect = 8.9
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 311 SWQARDACCGGTTSKKMFSDVGRKVFNSVLMNPAPSFSRRVDLALRSPQY 460
+WQ R GT+S+ + S V R F + P F+ L + P +
Sbjct: 9 TWQQRSFPSTGTSSQSVVSIVLRVPFPANRFQPDDIFTMEQFLKISHPPH 58
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 356 KMFSDVGRKVFNSVLMNPAPS 418
KM +G+K F ++L NPA S
Sbjct: 577 KMQWTLGQKNFETILKNPATS 597
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,967
Number of Sequences: 2352
Number of extensions: 11882
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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