BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_L10
(537 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF457547-1|AAL68777.1| 163|Anopheles gambiae selenoprotein prot... 209 4e-56
AY313948-1|AAP76391.1| 424|Anopheles gambiae cytochrome P450 CY... 26 0.92
AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein. 23 4.9
DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein. 23 8.6
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 23 8.6
>AF457547-1|AAL68777.1| 163|Anopheles gambiae selenoprotein
protein.
Length = 163
Score = 209 bits (511), Expect = 4e-56
Identities = 99/165 (60%), Positives = 121/165 (73%), Gaps = 1/165 (0%)
Frame = +3
Query: 9 VFGSVSVLAVLVTYDGAVAEFSTEDCASLGFIKANLLCSSCDQLKDFSLEQLVDHCKECC 188
+F +L +VT GA EFS EDC LG IK+ L CS+C L D+ L +L +HC ECC
Sbjct: 3 LFAITCLLFSIVTVIGA--EFSAEDCRELGLIKSQLFCSACSSLSDYGLIELKEHCLECC 60
Query: 189 HSD-ESASKEKKYARAILEVCTCKFPAYPQIQAFVKSDRPAKFPNLQIKYVRGLDPIIKL 365
D E+ SK K Y A+LEVCTCKF AYPQIQAF+KSDRPAKFPNL IKYVRGLDPI+KL
Sbjct: 61 QKDTEADSKLKVYPAAVLEVCTCKFGAYPQIQAFIKSDRPAKFPNLTIKYVRGLDPIVKL 120
Query: 366 LDKDGIVKDTVAIEKWNTDSVEEFLNTHLDKEHDDEPDFLKTNRI 500
+D+ G VK+T++I KWNTD+V+EF T L K DD D++KTNR+
Sbjct: 121 MDEQGTVKETLSINKWNTDTVQEFFETRLAKVEDD--DYIKTNRV 163
>AY313948-1|AAP76391.1| 424|Anopheles gambiae cytochrome P450
CYP6M4 protein.
Length = 424
Score = 25.8 bits (54), Expect = 0.92
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 360 KLLDKDGIVKDTVAIEKWNTDSVEEFLNTHLDKEHDDEPD 479
++ KD IV T ++ + T + L H D EH EP+
Sbjct: 315 RITAKDYIVPGTTSVLEAGTSVMIPVLGIHHDPEHFPEPE 354
>AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein.
Length = 437
Score = 23.4 bits (48), Expect = 4.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 189 HSDESASKEKKYARAILEVCTC 254
H DES KKY +++ C C
Sbjct: 415 HIDESNVNLKKYKNMVVKSCGC 436
>DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein.
Length = 595
Score = 22.6 bits (46), Expect = 8.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 381 IVKDTVAIEKWNTDSVEEFLNTHLDKEHDDEPDFLKT 491
+V + ++E T + + N + D E D+E DF+ +
Sbjct: 103 LVSNDPSLEPLVTWRLNDKCNRYNDDEEDEEDDFINS 139
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 22.6 bits (46), Expect = 8.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 315 PNLQIKYVRGLDPIIKLLDKDGIVKDTVA 401
PN Q KY+ L+ K++ K I+ TVA
Sbjct: 470 PNKQTKYLLQLNATEKMIPKAKILIATVA 498
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,588
Number of Sequences: 2352
Number of extensions: 10656
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -