Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_L10
         (537 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024211-2|AAF36064.2|  152|Caenorhabditis elegans Hypothetical ...   114   4e-26
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    29   2.8  
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt...    29   2.8  
Z48045-11|CAM33500.1|  887|Caenorhabditis elegans Hypothetical p...    28   4.9  
Z48045-10|CAA88101.2|  849|Caenorhabditis elegans Hypothetical p...    28   4.9  
U00035-3|AAA50645.1|  548|Caenorhabditis elegans Egg sterile (un...    28   4.9  
Z69646-6|CAD44142.1|  287|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z69646-5|CAA93474.1|  288|Caenorhabditis elegans Hypothetical pr...    27   6.5  
AL032627-12|CAB63357.1|  577|Caenorhabditis elegans Hypothetical...    27   6.5  
U80840-6|AAB37934.1|  317|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>AC024211-2|AAF36064.2|  152|Caenorhabditis elegans Hypothetical
           protein Y76B12C.3 protein.
          Length = 152

 Score =  114 bits (274), Expect = 4e-26
 Identities = 56/144 (38%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
 Frame = +3

Query: 33  AVLVTYDGAVAEFS--TEDCASLGFIKANLLCSSCDQLKDFSLEQLVDHCKECCHSDESA 206
           AV+    G V E+    E+C + GF    L C  C++L D+ LE L+  C +CC  +E  
Sbjct: 10  AVVSPMFGEVEEYKIDVEECKAAGFNPETLKCGLCERLSDYHLETLLTDCLQCCIKEEE- 68

Query: 207 SKEKKYARAILEVCTCKFPAYPQIQAFVKSDRPAKF-PNLQIKYVRGLDPIIKLLDKDGI 383
            K +KY  AILEVC C    +PQ+QAFV  D   +F   +++K+VRG+ P + L D D  
Sbjct: 69  FKHEKYPTAILEVCECNLARFPQVQAFVHKDMARQFGGKVKVKHVRGVRPQVALKDADFK 128

Query: 384 VKDTVAIEKWNTDSVEEFLNTHLD 455
            K+ +++EKW+TD++ +F N  L+
Sbjct: 129 TKEVLSVEKWDTDTLIDFFNQWLE 152


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
           protein F41G3.12 protein.
          Length = 1483

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +3

Query: 123 SSCDQLKDFSLEQLVDHCKECCHSDESASKEKKYARAILEVCTCKFPAYPQIQAFVKSDR 302
           S+C Q K F +      C EC H      +E    R+ + VC+   PA P + A +  + 
Sbjct: 568 SACHQSK-FVMTAFEGKCDECLHVQCRYGEE---CRSGVCVCSYNCPANPPLSARICGEN 623

Query: 303 PAKFPNL 323
              +P+L
Sbjct: 624 GVLYPSL 630


>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
           protein) homologfamily member protein.
          Length = 1473

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +3

Query: 123 SSCDQLKDFSLEQLVDHCKECCHSDESASKEKKYARAILEVCTCKFPAYPQIQAFVKSDR 302
           S+C Q K F +      C EC H      +E    R+ + VC+   PA P + A +  + 
Sbjct: 576 SACHQSK-FVMTAFEGKCDECLHVQCRYGEE---CRSGVCVCSYNCPANPPLSARICGEN 631

Query: 303 PAKFPNL 323
              +P+L
Sbjct: 632 GVLYPSL 638


>Z48045-11|CAM33500.1|  887|Caenorhabditis elegans Hypothetical
           protein C41C4.5b protein.
          Length = 887

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 228 RAILEVCTCKFPAYPQIQAFVKSDRPAKFPNL 323
           + I+E C C  P YP  + F  + +P +  N+
Sbjct: 560 KVIVEACGCADPMYPVAEMFGNNTKPCQAVNM 591


>Z48045-10|CAA88101.2|  849|Caenorhabditis elegans Hypothetical
           protein C41C4.5a protein.
          Length = 849

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 228 RAILEVCTCKFPAYPQIQAFVKSDRPAKFPNL 323
           + I+E C C  P YP  + F  + +P +  N+
Sbjct: 522 KVIVEACGCADPMYPVAEMFGNNTKPCQAVNM 553


>U00035-3|AAA50645.1|  548|Caenorhabditis elegans Egg sterile
           (unfertilizable) protein2 protein.
          Length = 548

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = +3

Query: 129 CDQLKDFSLEQLVDHCKEC-----CHSDESASKEKKYARAILEVCTC 254
           CD LKD S     ++CKEC     C +      EKK   ++L    C
Sbjct: 144 CDGLKDCSDGSDEENCKECQSIYSCRAHIEEESEKKDKTSVLPTLIC 190


>Z69646-6|CAD44142.1|  287|Caenorhabditis elegans Hypothetical
           protein F57C7.3b protein.
          Length = 287

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 100 KPREAQSSVENSATAPSYVTSTAKTETLPNT 8
           KP  + ++  +  T+PS+   TAK  T+P T
Sbjct: 87  KPPSSATTKSDKVTSPSHAVVTAKPTTVPTT 117


>Z69646-5|CAA93474.1|  288|Caenorhabditis elegans Hypothetical
           protein F57C7.3a protein.
          Length = 288

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 100 KPREAQSSVENSATAPSYVTSTAKTETLPNT 8
           KP  + ++  +  T+PS+   TAK  T+P T
Sbjct: 88  KPPSSATTKSDKVTSPSHAVVTAKPTTVPTT 118


>AL032627-12|CAB63357.1|  577|Caenorhabditis elegans Hypothetical
           protein Y41C4A.9 protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 16/69 (23%), Positives = 29/69 (42%)
 Frame = +3

Query: 9   VFGSVSVLAVLVTYDGAVAEFSTEDCASLGFIKANLLCSSCDQLKDFSLEQLVDHCKECC 188
           + G+   L +  T +G   E + E C   GF++  +L   C   KD     +++  +   
Sbjct: 154 IIGNKRKLEIASTQEGGADEETIESCRDSGFVRPVVLV-LCAFKKD--AYDIINRLRRIL 210

Query: 189 HSDESASKE 215
           H D+    E
Sbjct: 211 HGDDEGKSE 219


>U80840-6|AAB37934.1|  317|Caenorhabditis elegans Hypothetical
           protein F08D12.11 protein.
          Length = 317

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 301 LSLFTKAWICGYAGNLHVQTSNMARAYFFSFEA 203
           L++F K WI G+ GNL++          +S EA
Sbjct: 235 LNIFLKHWIIGFIGNLNMVQLKKHDGRMWSLEA 267


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,694,434
Number of Sequences: 27780
Number of extensions: 238108
Number of successful extensions: 839
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)