Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_K13
         (537 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666...   244   4e-65
01_01_1234 - 10007446-10007940,10008030-10008125,10008980-100092...    29   2.3  
10_02_0192 + 6517985-6518348,6518647-6518699,6519984-6520021,652...    29   3.1  
08_01_0346 - 3063440-3064189                                           28   5.4  
01_06_1329 + 36354340-36354493,36355781-36355942,36356279-363564...    28   5.4  
05_04_0322 + 20239793-20240127,20240176-20240728,20241317-202414...    27   7.2  
01_03_0285 - 14604499-14604608,14604692-14605203,14605339-146054...    27   9.5  

>07_03_1220 -
           24966169-24966327,24966421-24966552,24966639-24966693,
           24967496-24967667,24967771-24967918,24968015-24968050
          Length = 233

 Score =  244 bits (597), Expect = 4e-65
 Identities = 120/143 (83%), Positives = 127/143 (88%)
 Frame = +1

Query: 109 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 288
           AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR IRELTSVVQKRFN
Sbjct: 21  AELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFN 80

Query: 289 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEXVV 468
            PE  V LYAEKV  RGLCAIAQAESLRYKL+GGLAVRRACYGVLRF+MESGA+GCE +V
Sbjct: 81  FPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIV 140

Query: 469 SGXLRGQRAKSMKFVXGLMIHSG 537
           SG LR QRAKSMKF  G MI SG
Sbjct: 141 SGKLRAQRAKSMKFKDGYMISSG 163


>01_01_1234 -
           10007446-10007940,10008030-10008125,10008980-10009253,
           10009381-10009682,10010078-10010123,10010319-10010368,
           10011124-10011268,10012051-10012229,10012327-10012485,
           10012636-10012887,10012972-10013097,10013197-10013525,
           10014183-10014252
          Length = 840

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -1

Query: 192 RADGSDPHFHAGVAVLGQLPSEELIEFCLENPXS 91
           R DG +PH  A   + G    ++    CL  P S
Sbjct: 768 RQDGGEPHLQAAAVLAGSRGGDDAAHACLRRPSS 801


>10_02_0192 +
           6517985-6518348,6518647-6518699,6519984-6520021,
           6522332-6522717,6523752-6523822,6524620-6524732,
           6525019-6525337,6525576-6525886,6526493-6527069,
           6530483-6530538,6531643-6532126
          Length = 923

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +2

Query: 128 SLGSWPRTAT-PAWKCGSLPSARRSLLWPPGHRVCS 232
           ++ SWPR    P W C S    RR L   P  R C+
Sbjct: 10  AVSSWPRLPRLPPWPCASHAQRRRVLRLLPPRRRCA 45


>08_01_0346 - 3063440-3064189
          Length = 249

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +1

Query: 358 AESLRYKLIGGLAVRRACYGVLR 426
           A S    L+GG A   ACYGVLR
Sbjct: 221 ARSAARVLLGGWAAMAACYGVLR 243


>01_06_1329 +
           36354340-36354493,36355781-36355942,36356279-36356457,
           36356719-36356918,36356938-36357014,36357110-36357111,
           36357594-36357701,36357806-36358024,36358167-36358448
          Length = 460

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = -2

Query: 317 AYNXTDCSGMLNRFCTTEVSSRIXRPFSPS----TLCVLVAIIM 198
           A+  TD +G+L+  CT +V S++    S S    TLC+   II+
Sbjct: 332 AHALTDRNGLLSLLCTPDVGSKLGGRASASRYTNTLCITRTIII 375


>05_04_0322 +
           20239793-20240127,20240176-20240728,20241317-20241425,
           20244456-20244723,20244943-20245197,20245594-20246539
          Length = 821

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +3

Query: 324 GGYSWPLRYRPG-RISKIQAYRRSRCTSCLLWC 419
           G  SW  RY+    ISK   Y   RC  C++ C
Sbjct: 665 GALSWSRRYQIAIGISKGLPYLHERCRDCIIHC 697


>01_03_0285 -
           14604499-14604608,14604692-14605203,14605339-14605418,
           14605597-14605699,14605759-14605907,14606088-14606180,
           14606289-14606675,14607690-14608124,14608198-14608311,
           14608405-14608453,14608684-14608843,14608941-14609499
          Length = 916

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/41 (24%), Positives = 24/41 (58%)
 Frame = +1

Query: 121 EFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKG 243
           +F+T ++  DG++ VE R   ++ + +++ +R    +G  G
Sbjct: 150 QFVTAKVGNDGWAAVEKRFNQLQVDGVLLRSRFGKCIGMDG 190


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,530,913
Number of Sequences: 37544
Number of extensions: 228616
Number of successful extensions: 607
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)