Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_K13
(537 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal prot... 248 5e-66
BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p pro... 248 5e-66
AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p pro... 248 5e-66
AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA... 248 5e-66
X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal prot... 240 1e-63
AE014298-2726|AAF48847.1| 494|Drosophila melanogaster CG15046-P... 33 0.33
AJ238847-1|CAB52798.1| 1301|Drosophila melanogaster drosophila d... 30 2.3
AF132179-1|AAD34767.1| 1301|Drosophila melanogaster unknown prot... 30 2.3
AE013599-2691|AAM68451.1| 1301|Drosophila melanogaster CG5170-PF... 30 2.3
AE013599-2690|AAM68450.1| 1301|Drosophila melanogaster CG5170-PE... 30 2.3
AE013599-2689|AAM68449.1| 1301|Drosophila melanogaster CG5170-PD... 30 2.3
AE013599-2688|AAF57691.2| 1301|Drosophila melanogaster CG5170-PC... 30 2.3
AE013599-2687|AAS64810.1| 1301|Drosophila melanogaster CG5170-PB... 30 2.3
AE013599-2686|AAS64809.1| 1301|Drosophila melanogaster CG5170-PA... 30 2.3
AE014296-1922|AAF50084.1| 557|Drosophila melanogaster CG7616-PA... 29 4.0
AE014297-1476|AAF54775.1| 588|Drosophila melanogaster CG4066-PA... 28 9.3
>L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal protein
S3/AP endonucleaseDNA repair protein protein.
Length = 246
Score = 248 bits (606), Expect = 5e-66
Identities = 122/143 (85%), Positives = 129/143 (90%)
Frame = +1
Query: 109 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 288
AELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGR IRELT++VQKRFN
Sbjct: 21 AELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFN 80
Query: 289 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEXVV 468
+ LYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+GCE VV
Sbjct: 81 FETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVV 140
Query: 469 SGXLRGQRAKSMKFVXGLMIHSG 537
SG LRGQRAKSMKFV GLMIHSG
Sbjct: 141 SGKLRGQRAKSMKFVDGLMIHSG 163
>BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p
protein.
Length = 253
Score = 248 bits (606), Expect = 5e-66
Identities = 122/143 (85%), Positives = 129/143 (90%)
Frame = +1
Query: 109 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 288
AELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGR IRELT++VQKRFN
Sbjct: 28 AELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFN 87
Query: 289 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEXVV 468
+ LYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+GCE VV
Sbjct: 88 FETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVV 147
Query: 469 SGXLRGQRAKSMKFVXGLMIHSG 537
SG LRGQRAKSMKFV GLMIHSG
Sbjct: 148 SGKLRGQRAKSMKFVDGLMIHSG 170
>AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p
protein.
Length = 246
Score = 248 bits (606), Expect = 5e-66
Identities = 122/143 (85%), Positives = 129/143 (90%)
Frame = +1
Query: 109 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 288
AELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGR IRELT++VQKRFN
Sbjct: 21 AELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFN 80
Query: 289 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEXVV 468
+ LYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+GCE VV
Sbjct: 81 FETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVV 140
Query: 469 SGXLRGQRAKSMKFVXGLMIHSG 537
SG LRGQRAKSMKFV GLMIHSG
Sbjct: 141 SGKLRGQRAKSMKFVDGLMIHSG 163
>AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA
protein.
Length = 246
Score = 248 bits (606), Expect = 5e-66
Identities = 122/143 (85%), Positives = 129/143 (90%)
Frame = +1
Query: 109 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 288
AELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGR IRELT++VQKRFN
Sbjct: 21 AELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFN 80
Query: 289 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEXVV 468
+ LYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+GCE VV
Sbjct: 81 FETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVV 140
Query: 469 SGXLRGQRAKSMKFVXGLMIHSG 537
SG LRGQRAKSMKFV GLMIHSG
Sbjct: 141 SGKLRGQRAKSMKFVDGLMIHSG 163
>X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal protein
S3 protein.
Length = 246
Score = 240 bits (587), Expect = 1e-63
Identities = 119/143 (83%), Positives = 126/143 (88%)
Frame = +1
Query: 109 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 288
AELNEFLTRELAEDGYSGVEVRVTP +EIIIMAT+TQ VL EKGR IRELT++VQKRFN
Sbjct: 21 AELNEFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGRRIRELTAMVQKRFN 80
Query: 289 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEXVV 468
+ LYAEKVA RGLCAIAQAESLRYKL G LAVRRACYGVLR+IMESGA+GCE VV
Sbjct: 81 FETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLRYIMESGAKGCEVVV 140
Query: 469 SGXLRGQRAKSMKFVXGLMIHSG 537
SG LRGQRAKSMKFV GLMIHSG
Sbjct: 141 SGKLRGQRAKSMKFVDGLMIHSG 163
>AE014298-2726|AAF48847.1| 494|Drosophila melanogaster CG15046-PA
protein.
Length = 494
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 62 TIFQRSENLLXMGFSRQNSMSSSLGSWPRTATPAWKCGSLPS 187
T QRS +L+ +G+ + L P P W CG LP+
Sbjct: 364 TRLQRSGSLVAVGWGKGEDTDCPLFEMPMRLRPTWACGDLPN 405
>AJ238847-1|CAB52798.1| 1301|Drosophila melanogaster drosophila
dodeca-satellite protein1 protein.
Length = 1301
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 178 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 303
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AF132179-1|AAD34767.1| 1301|Drosophila melanogaster unknown
protein.
Length = 1301
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 178 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 303
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2691|AAM68451.1| 1301|Drosophila melanogaster CG5170-PF,
isoform F protein.
Length = 1301
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 178 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 303
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2690|AAM68450.1| 1301|Drosophila melanogaster CG5170-PE,
isoform E protein.
Length = 1301
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 178 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 303
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2689|AAM68449.1| 1301|Drosophila melanogaster CG5170-PD,
isoform D protein.
Length = 1301
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 178 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 303
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2688|AAF57691.2| 1301|Drosophila melanogaster CG5170-PC,
isoform C protein.
Length = 1301
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 178 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 303
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2687|AAS64810.1| 1301|Drosophila melanogaster CG5170-PB,
isoform B protein.
Length = 1301
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 178 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 303
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2686|AAS64809.1| 1301|Drosophila melanogaster CG5170-PA,
isoform A protein.
Length = 1301
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 178 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 303
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE014296-1922|AAF50084.1| 557|Drosophila melanogaster CG7616-PA
protein.
Length = 557
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 195 LRADGSDPHFHAGVAVLGQLPSEELIEFCLEN 100
LR D +DP + V +L + +E L+E CL N
Sbjct: 84 LRLDENDPEYETKVKLLHKKSAERLLETCLLN 115
>AE014297-1476|AAF54775.1| 588|Drosophila melanogaster CG4066-PA
protein.
Length = 588
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 486 TTQXARYNXFTTTGTRFHDETENTIASTTYSETS 385
TT + N TT+G+ DET T ++T S TS
Sbjct: 193 TTSDSTTNEITTSGSTKKDETSTTTSTTADSITS 226
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,464,192
Number of Sequences: 53049
Number of extensions: 373152
Number of successful extensions: 897
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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