Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_K09
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 124 4e-29
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 109 2e-24
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 54 7e-16
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 31 0.54
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 31 0.54
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 31 0.54
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 31 0.71
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 31 0.71
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 31 0.94
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 30 1.2
Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical pr... 30 1.6
U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormon... 29 3.8
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 28 5.0
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 28 5.0
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 28 5.0
AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical ... 28 5.0
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical... 28 6.7
Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical pr... 27 8.8
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 124 bits (300), Expect = 4e-29
Identities = 77/199 (38%), Positives = 113/199 (56%)
Frame = +2
Query: 56 ENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTES 235
+NFR K LIAA+ + V +A G+ ++ KFP G PAFE G LL +
Sbjct: 10 DNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---GDALLFGA 57
Query: 236 NAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAK 415
+I ++ S A QW +++ LLPA +V P + F+K+ VE+ K
Sbjct: 58 ESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYK 110
Query: 416 SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFL 595
++L L+VLD L+ +T+LV ER++LADV V LL AFQ+VLD + R S++NV RWF
Sbjct: 111 NELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRWFR 170
Query: 596 TVAHQPQVSAVVGSLTLCA 652
TV +QP V V+G ++L +
Sbjct: 171 TVVNQPAVKEVLGEVSLAS 189
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 109 bits (262), Expect = 2e-24
Identities = 56/141 (39%), Positives = 86/141 (60%)
Frame = +2
Query: 230 ESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVER 409
E +A+ + + L + A QW +++ LLPA +V P + F+K+ VE+
Sbjct: 24 EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 83
Query: 410 AKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRW 589
K++L L+VLD L+ +T+LV ER++LADV V LL AFQ+VLD + R S++NV RW
Sbjct: 84 YKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRW 143
Query: 590 FLTVAHQPQVSAVVGSLTLCA 652
F TV +QP V V+G ++L +
Sbjct: 144 FRTVVNQPAVKEVLGEVSLAS 164
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 54.4 bits (125), Expect(2) = 7e-16
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Frame = +2
Query: 56 ENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTES 235
+NFR K LIAA+ + V +A G+ ++ KFP G PAFE G LL +
Sbjct: 10 DNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---GDALLFGA 57
Query: 236 NAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAK 415
+I ++ S A QW +++ LLPA +V P + F+K+ VE+ K
Sbjct: 58 ESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYK 110
Query: 416 SDLLAALK-VLDGH 454
++L L+ VLD +
Sbjct: 111 NELNGQLQYVLDAN 124
Score = 46.8 bits (106), Expect(2) = 7e-16
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 536 QHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCA 652
Q+VLD + R S++NV RWF TV +QP V V+G ++L +
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLAS 156
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 119 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 298
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 299 RVWQ 310
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 119 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 298
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 299 RVWQ 310
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 119 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 298
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 299 RVWQ 310
++WQ
Sbjct: 1085 QIWQ 1088
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 539 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTL 646
H L PS+ ++L +V RW L A P V GSL L
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLL 120
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 539 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTL 646
H L PS+ ++L +V RW L A P V GSL L
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLL 120
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
protein ZK430.1 protein.
Length = 1650
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 269 DFHWQRSKRWHCFQLGAPFHRHFRMQALFRQETSSR-SLRTCWSRQIRNSV 120
DF W+RSK W Q ++ R SS+ S+ TC + IR++V
Sbjct: 153 DFDWKRSKEWQFMQQFTKTETPIPFTSIARATLSSKHSIITCITDHIRHAV 203
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 30.7 bits (66), Expect = 0.94
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 68 AYKALIAAQYSGTDVKVAPNFVFGETNKSE-DFLKKFPAGKVPAFESADGKVLLTESNAI 244
A++ IA D + P +F E +K+ +F+K PA KVP + LTES AI
Sbjct: 15 AWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTL--VINGLSLTESLAI 72
Query: 245 AYYV 256
Y+
Sbjct: 73 IEYL 76
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 23 PWRPGYFTLIXENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSED-FLKKFPAGKVPAF 199
P PG + L F Y + + ++ V V ++S + +L K P G+VPA
Sbjct: 93 PLTPGNYRLYSMRFCPYAQRVLIYLAKKNIPV--EVVNVNPDRSPNWYLPKSPIGRVPAL 150
Query: 200 ESADGKVLLTESNAIAYYV 256
E +GKV + ESN I Y+
Sbjct: 151 E-INGKV-VWESNVIVEYL 167
>Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical
protein T24D5.5 protein.
Length = 408
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 260 WQRSKRWHCFQLGAPFHRHFRMQALFRQETSSRSLRTCWSRQIRNSV 120
W+R +R H ++G+ RHF+ + + SL CW R + V
Sbjct: 304 WKRYQRKH--KMGSEETRHFKGSSSLSNMNAQSSLMVCWKRSTDDRV 348
>U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 78 protein.
Length = 387
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 317 SWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 436
S+ ++ +L A C W + + + +K+NV + KS L+ L
Sbjct: 298 SFEENAILKALCCWQTAHFKLEECDKENVRKQKSLLVQCL 337
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 28.3 bits (60), Expect = 5.0
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = -3
Query: 313 PLPDTGLGSQISSAETFIGNVVSDGI--AFS*EHLSIGT-FECRHFSGRKLLQEVFGLVG 143
P+ + + +S TF+G VVSDGI S S+ T FE R R++L+ V+
Sbjct: 514 PMNGSTIREDFASESTFLGRVVSDGIMPRISASSNSVLTEFETRF---RRILKRVYR--S 568
Query: 142 LAKYEIR 122
L ++EIR
Sbjct: 569 LQQHEIR 575
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 149 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 256
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 97
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 149 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 256
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 380
>AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical
protein Y57E12AL.2 protein.
Length = 121
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 359 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTER 487
VF L ++ F +N E+ KS++LAA G TF+ T +
Sbjct: 35 VFALLAVVAFANRNPEQMKSEMLAAGVSAAGVATISTFMETHK 77
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 149 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 256
K + + K G+VP E A+GK L+ ES I Y+
Sbjct: 62 KPDWYFTKNYKGQVPTLEHAEGKKLVIESAVIPEYL 97
>AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical
protein F41E6.1 protein.
Length = 239
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 176 ETSSRSLRTCWSRQIRNSVLLSHQSRNIVR 87
ET +R CWSR N+V R++VR
Sbjct: 167 ETGGAIVRDCWSRVFSNAVKNPRARRDVVR 196
>Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical
protein C33D9.6 protein.
Length = 485
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +2
Query: 392 KQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLDPSVRSSL 571
K+ +E+ +D++A +G ++ F+V +R + + + + F LD +V S L
Sbjct: 54 KEGLEKIVNDIIA-----NGTIIDEMFVVLQRFSEKPALS-NPIQRPFYSNLDDNVPSFL 107
Query: 572 INVQRWFL 595
N+Q+W L
Sbjct: 108 RNLQKWRL 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,259,640
Number of Sequences: 27780
Number of extensions: 361601
Number of successful extensions: 999
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -