Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_K08
(629 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 260 9e-70
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 260 9e-70
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 256 8e-69
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 135 2e-32
07_03_1357 - 25982861-25983068,25983354-25983361 72 4e-13
07_03_1358 - 25984897-25984997,25985623-25985650 37 0.015
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 33 0.25
07_03_0366 + 17321948-17322331 30 1.7
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 29 3.0
02_05_1008 - 33461225-33462334 29 3.0
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 4.0
03_06_0069 - 31449319-31450368 28 5.3
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906... 28 5.3
08_01_0267 - 2153421-2153759,2153895-2154098,2154358-2154429,215... 28 7.0
08_02_0531 + 18256597-18256836,18257637-18257735,18258038-182581... 27 9.3
07_03_0696 - 20754773-20754821,20754930-20755028,20755107-207552... 27 9.3
03_06_0653 - 35305279-35306163 27 9.3
02_01_0312 - 2082614-2082677,2082815-2082945,2083041-2083129,208... 27 9.3
01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435... 27 9.3
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 260 bits (636), Expect = 9e-70
Identities = 121/176 (68%), Positives = 147/176 (83%)
Frame = +3
Query: 93 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 272
RP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG AL
Sbjct: 19 RPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEAL 78
Query: 273 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 452
LRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV
Sbjct: 79 LRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRV 138
Query: 453 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGGGAANDEXED 620
+Q+VNIPSF+VR++S KHIDFSL SPFGGG P RVKRKN +K GGG +E ++
Sbjct: 139 GRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGGGDGEEEDE 194
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 260 bits (636), Expect = 9e-70
Identities = 121/176 (68%), Positives = 147/176 (83%)
Frame = +3
Query: 93 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 272
RP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG AL
Sbjct: 42 RPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEAL 101
Query: 273 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 452
LRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV
Sbjct: 102 LRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRV 161
Query: 453 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGGGAANDEXED 620
+Q+VNIPSF+VR++S KHIDFSL SPFGGG P RVKRKN +K GGG +E ++
Sbjct: 162 GRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGGGDGEEEDE 217
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 256 bits (628), Expect = 8e-69
Identities = 120/168 (71%), Positives = 143/168 (85%)
Frame = +3
Query: 93 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 272
RP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG AL
Sbjct: 235 RPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEAL 294
Query: 273 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 452
LRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV
Sbjct: 295 LRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRV 354
Query: 453 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGGG 596
+Q+VNIPSF+VR++S KHIDFSL SPFGGG P RVKRKN +K GGG
Sbjct: 355 GRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGG 402
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 135 bits (327), Expect = 2e-32
Identities = 70/118 (59%), Positives = 85/118 (72%)
Frame = +3
Query: 93 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 272
RP+EK R D ELK+ GEYGLR+K E+WRV+ ELLTL+EK+P+R+FEG AL
Sbjct: 19 RPYEKERPDAELKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNPRRIFEGEAL 67
Query: 273 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHI 446
LR + R G+L E Q KLDYVL L +E+FL+ RLQT VFK G KSIHH +LIRQ HI
Sbjct: 68 LRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHHDHVLIRQHHI 125
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 71.7 bits (168), Expect = 4e-13
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = +3
Query: 447 RVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGGGAANDEXE 617
RV +Q+VNIPSFIVRL+S KHI FSL SP GG RVKRKN + GGG +E E
Sbjct: 3 RVGRQLVNIPSFIVRLESEKHIAFSLTSPLGGSPAVRVKRKNQKASGGGGDGEEEEE 59
>07_03_1358 - 25984897-25984997,25985623-25985650
Length = 42
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 93 RPFEKARLDQELKIIGEYG 149
RP+EK RLD ELK++GEYG
Sbjct: 19 RPYEKERLDAELKLVGEYG 37
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 32.7 bits (71), Expect = 0.25
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +3
Query: 228 LEEKDPKRLFEGNALL-RRLVRIGVLDEKQMKLDYVLGLKIEDFLE---RRLQTQVFKAG 395
L E+D + + G L+ ++LV I KQM ++ D L RRL T + K
Sbjct: 37 LVERDDYKKYNGICLMVQKLVNI----IKQMDPRDPYRAEMTDMLLDKLRRLATVMVKLK 92
Query: 396 LAKSIHHARILIRQRHIRVRKQVVNIPSFIV 488
A+ + A I+Q H+RV + V P+F+V
Sbjct: 93 FAEHLKEAVTYIQQGHVRVGPETVTDPAFLV 123
>07_03_0366 + 17321948-17322331
Length = 127
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 501 GKHIDFSLKSPFGGGRPXRVKRKNLRKGQGGGAANDE 611
G ++ +S GGG R +R+ R+G GGGA E
Sbjct: 32 GDTVEAERQSRHGGGGRRRRQRRGRRRGSGGGAMEAE 68
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 362 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPIIYCA 490
A+S G SW CQ++DPAK Y+ Q H I+ A
Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYNFIQTGV-HGRIFAA 435
>02_05_1008 - 33461225-33462334
Length = 369
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = +3
Query: 306 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 485
E Q+ L+Y+ G +E RR+ ++ F A +A+ + + +RHI V + + PS +
Sbjct: 163 ELQILLEYMDGGSLEG---RRIASEAFLADVARQVLSGIAYLHRRHI-VHRDIK--PSNL 216
Query: 486 VRLDSGKHIDFSLKSPFGGGR 548
+ +DSG+ + + FG GR
Sbjct: 217 L-IDSGRRVKI---ADFGVGR 233
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 345 IEDFLERRLQTQVFKAGLAKSIHHAR 422
+ED+ E L T F A L KS+H AR
Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRAR 135
>03_06_0069 - 31449319-31450368
Length = 349
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 417 HDGWTSPGQL*TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYE 286
HD +S G L P+SA +P + SDQ H VS+ P Y+
Sbjct: 237 HDVLSSLG-LKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYD 279
>01_06_0939 -
33188620-33189252,33189570-33189680,33190460-33190668,
33190781-33191078
Length = 416
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 120 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 242
Q L+ I G+ + +E++ + +L RIR R LT+E D
Sbjct: 212 QRLQTIHLLGIDDNQEIFTTQTSLTRIRAVPRYSLTIESLD 252
>08_01_0267 -
2153421-2153759,2153895-2154098,2154358-2154429,
2154514-2154599,2154704-2154830,2154899-2155052,
2156129-2156451
Length = 434
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 144 TLR*SSTLGQDVPFQKDDRGVTYVFENTDRYSVVHHLG 31
T+ +ST GQ+ P + +DRG + E R SV+ G
Sbjct: 64 TILSNSTTGQESPREVEDRGASMWLEGPGRKSVISASG 101
>08_02_0531 +
18256597-18256836,18257637-18257735,18258038-18258184,
18258295-18258427,18258521-18258585,18258792-18258962,
18259095-18259199,18259495-18259602,18259792-18260088,
18260191-18260256,18260477-18260679,18261178-18261232,
18261318-18261503,18261701-18261985
Length = 719
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 99 FEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAR----ELLTLE 233
FE A+ ++ KII E R+ ++ +KY LA A ELL L+
Sbjct: 394 FEMAKQEESKKIISEEHQRSNEQITDLKYKLANCMNALESKNLELLNLQ 442
>07_03_0696 -
20754773-20754821,20754930-20755028,20755107-20755226,
20755317-20755402,20756013-20756109,20756181-20756268,
20756358-20756454,20756797-20756892,20757029-20757125,
20757571-20757689,20758559-20758616,20758751-20758857
Length = 370
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 286 FVLEYWMKNR*NSIMCLV*RLRTSWSVVC 372
FV +W + + M LV RL TSW+VVC
Sbjct: 273 FVDAFWNSKKQSFTMHLV-RLMTSWAVVC 300
>03_06_0653 - 35305279-35306163
Length = 294
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 504 KHIDFSLKSPFGGGRPXRVKRKNLRKGQGGG 596
K++ L GG+P R +R +R GGG
Sbjct: 19 KYLQRKLWKRINGGKPRRKRRPEVRSASGGG 49
>02_01_0312 -
2082614-2082677,2082815-2082945,2083041-2083129,
2083223-2083292,2083429-2083509,2083768-2083821,
2084864-2085067,2086272-2086366,2086976-2086997,
2087492-2087585,2087677-2087764,2087874-2087979,
2088103-2088189,2088261-2088309,2088418-2088521,
2088605-2088697,2088900-2088974,2089316-2089384,
2090182-2090250,2090339-2090374,2090471-2090565,
2090836-2090911,2091067-2091153,2091287-2091355,
2091654-2091731,2091836-2091925,2092436-2092642,
2092736-2092879
Length = 841
Score = 27.5 bits (58), Expect = 9.3
Identities = 21/51 (41%), Positives = 23/51 (45%)
Frame = +3
Query: 87 LDRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEK 239
L+ P KA LD K IG+ L R RV YT K E L EEK
Sbjct: 706 LEFPTGKASLDGVSKCIGDAFLVTVRNKKRVGYTYELSLKFKGEWLIKEEK 756
>01_07_0290 - 42542201-42542359,42542443-42542551,42542729-42543516,
42543601-42543744,42543840-42544013,42544056-42544369,
42544467-42544636,42544916-42545043,42545125-42545185,
42545473-42545642,42545783-42547387,42547479-42547631,
42547747-42547905,42548066-42548236,42548357-42548404,
42548509-42548624,42548885-42549029,42549122-42549220
Length = 1570
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 537 GGGRPXRVKRKNLRKGQGGG 596
G RP RKN +GQGGG
Sbjct: 1369 GSSRPGEWNRKNNNRGQGGG 1388
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,766,072
Number of Sequences: 37544
Number of extensions: 390031
Number of successful extensions: 1108
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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