Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_K08
         (629 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   2.6  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   3.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   6.1  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 525  KSPFGGGRPXRVKRKNLRKGQGGGAANDEXE 617
            KS  GGG   R +++  R+G GG + ++E E
Sbjct: 947  KSQGGGGS--RKRKEKARRGSGGDSDSEEEE 975


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 170 YFTLVAETVLSDDLQLLVKTCLFKRTIEVSRTSLK 66
           YFT +   V +DD+++ +K  L    I+V R + K
Sbjct: 257 YFTNIKSHVSADDMRVWLKAVLPTDNIDVYRLTKK 291


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -1

Query: 155  AETVLSDDLQLLVKTCLFKRTIEVSRTSLKIPTGTL 48
            A T  S D+Q+ + T  F+  I   +++LK+ + ++
Sbjct: 1556 AATTYSGDIQIEIATLKFRMHIAKDQSTLKVKSQSI 1591


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -1

Query: 155  AETVLSDDLQLLVKTCLFKRTIEVSRTSLKIPTGTL 48
            A T  S D+Q+ + T  F+  I   +++LK+ + ++
Sbjct: 1557 AATTYSGDIQIEIATLKFRMHIAKDQSTLKVKSQSI 1592


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,665
Number of Sequences: 2352
Number of extensions: 14002
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)