Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_K07
         (482 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   199   7e-52
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    67   5e-12
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    43   1e-04
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    27   5.4  
L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical pr...    27   5.4  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  199 bits (486), Expect = 7e-52
 Identities = 93/148 (62%), Positives = 112/148 (75%), Gaps = 1/148 (0%)
 Frame = +3

Query: 30  ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 209
           ERTFI +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  +PFFP L
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSL 64

Query: 210 XKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 389
            +YMSSGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ GRNI HGSD+V+
Sbjct: 65  IEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVD 124

Query: 390 SAKKEIXLWFTDKEVVGW-TPANENWVY 470
           SA +EI  WF  +E+  + +P   +WVY
Sbjct: 125 SANREIAHWFKQEEINDYASPFINSWVY 152


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 67.3 bits (157), Expect = 5e-12
 Identities = 37/79 (46%), Positives = 47/79 (59%)
 Frame = +3

Query: 189 RPFFPGLXKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNII 368
           +PFFP L  YMSSGPVV M+WEG +VVK  R +LG       +  +I  DL ++      
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91

Query: 369 HGSDSVESAKKEIXLWFTD 425
           H SDSV SA +E  LWF +
Sbjct: 92  HCSDSVASANREYVLWFEE 110


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
 Frame = +3

Query: 42  IMVKPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGLXKY 218
           +++KP+ V  R L    +      G ++  ++ +  S  L +Q Y+    + F+  L ++
Sbjct: 14  VVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQGKFFYDRLVRH 73

Query: 219 MSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVESAK 398
           +SSGPV+ M   G      G   L        QP  IR    +   RN+ H SD  ++A+
Sbjct: 74  ISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVAHASDE-DAAE 130

Query: 399 KEIXLW 416
           KE+ L+
Sbjct: 131 KELQLF 136


>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
            F12F6.6 protein.
          Length = 1126

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +3

Query: 183  ASRPFFPGLXKYMSSGPVVPMVWEGLNVVKTGRQML---GATNPXDSQPGTI 329
            AS  F      Y+    V+  VW G    +T  Q +   GATN  D++ GTI
Sbjct: 1003 ASSEFLENSKAYIIDNGVILFVWVGSACPQTWVQDVFGVGATNQIDTESGTI 1054


>L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical
           protein K02D10.4 protein.
          Length = 227

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 77  CGHHY*TFRKERLQTSRFEIRMAIRRTSP 163
           CGH        R +T +FE R+ ++R+SP
Sbjct: 107 CGHPVEVDDHHRRETKKFENRLTLKRSSP 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,761,828
Number of Sequences: 27780
Number of extensions: 208144
Number of successful extensions: 599
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)