Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_J12
(382 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 58 3e-09
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 28 2.0
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical pr... 28 2.0
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 28 2.6
Z92849-4|CAB07431.2| 169|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 27 3.4
U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein. 27 3.4
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 27 3.4
AF003146-4|AAB54200.2| 650|Caenorhabditis elegans Hypothetical ... 27 6.0
AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical... 26 7.9
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 57.6 bits (133), Expect = 3e-09
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = +1
Query: 148 QLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLP 327
++E F+++ L EKIVLPSA+D+ EK L D I F S LK TET EKN LP
Sbjct: 53 EIEHFDSTKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLP 112
Score = 50.4 bits (115), Expect = 4e-07
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = +1
Query: 175 LRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIE 345
L+ V+T EK VLP+ EDVA EK IE FDS++L T +EK LP D I+
Sbjct: 24 LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIK 80
Score = 38.7 bits (86), Expect = 0.001
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +1
Query: 136 DLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTET 306
+L ++ F + L+ +T EK VLPS DVA EKT + FD S L H ET
Sbjct: 87 ELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKTLQM----AASFDKSALHHVET 139
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -1
Query: 325 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 173
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -1
Query: 325 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 173
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -1
Query: 325 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 173
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -1
Query: 325 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 173
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.7 protein.
Length = 329
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 240 LLSGNVFSRRKHNLFIGVDVTETAGVEAFEL 148
LL N+FS H +F+G+ + E + F+L
Sbjct: 58 LLYQNLFSANIHQIFLGITIVERLNIAFFKL 88
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 229 ATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAGEGKEQ 366
ATE+ + G+EK ++ K T+ E+ DK E E KE+
Sbjct: 385 ATEQLKDGTIKGLEKNQKTEEKETKKNEEKKSEDKSE-EKSESKEE 429
>Z92849-4|CAB07431.2| 169|Caenorhabditis elegans Hypothetical
protein H12D21.5 protein.
Length = 169
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 232 TEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAGEGKEQIPER 378
T+K K+ G + +S+ K T+ N PD+ + E KE +P++
Sbjct: 117 TKKGLKNQKKGKKSKNSNNTKSTDNTGDNAQPDEQKQQKLESKENVPDQ 165
>Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical protein
F39B2.4b protein.
Length = 1589
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 87 PXSDTPSLKDLPKXRHRPEESARRLQHQLSP 179
P TPS+ LP+ +H +++ HQ+ P
Sbjct: 1411 PLESTPSVSSLPQMQHHLQQAPLLPSHQMMP 1441
>Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical protein
F39B2.4a protein.
Length = 1587
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 87 PXSDTPSLKDLPKXRHRPEESARRLQHQLSP 179
P TPS+ LP+ +H +++ HQ+ P
Sbjct: 1409 PLESTPSVSSLPQMQHHLQQAPLLPSHQMMP 1439
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 27.5 bits (58), Expect = 3.4
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +1
Query: 214 SAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDA---IEAGEGKEQIPERD 381
+A+D E + GIEK SS K +E +EK+ KD + G G+ I E D
Sbjct: 112 AADDDDEEDELDAFMAGIEKQASSDKKVSEQKEKDRKEGKDTEDPSKKGLGRADIDEED 170
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 27.5 bits (58), Expect = 3.4
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +1
Query: 52 LIKNILIQNGLLR*VTLPP*KTSPRXATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVA 231
LI+N L LLR V + + A D+ E F T L +VD ++ +D++
Sbjct: 104 LIENHLHSRSLLRIVFVVDSAAFSKNARDVA---ELFYTVALENVDKVPILIACHKQDLS 160
Query: 232 TEKTQKSLFDGIEK 273
KT+K + + +EK
Sbjct: 161 LAKTEKVIRNSLEK 174
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 328 PEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 221
P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 76 PKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 328 PEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 221
P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 76 PKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein.
Length = 1587
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 87 PXSDTPSLKDLPKXRHRPEESARRLQHQLSP 179
P TPS+ LP+ +H +++ HQ+ P
Sbjct: 1409 PLESTPSVSSLPQMQHHLQQAPLLPSHQMMP 1439
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 298 TETQEKNPLPDKDAIEAGEGKEQIPE 375
T ++KN +P+ D A E K +PE
Sbjct: 337 TAAEDKNDVPESDVKTAAEDKNDVPE 362
>AF003146-4|AAB54200.2| 650|Caenorhabditis elegans Hypothetical
protein F56F4.3 protein.
Length = 650
Score = 26.6 bits (56), Expect = 6.0
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 259 DGIEKFDS-SQLKHTETQEKNPLPDKDAIEAGEGKEQIPERD 381
DGIEKFD+ +L + T N P K IEA E +++I R+
Sbjct: 12 DGIEKFDNDEELAISPTGNPNLNPSK--IEAEELEQEIGSRN 51
>AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical
protein Y18D10A.17 protein.
Length = 340
Score = 26.2 bits (55), Expect = 7.9
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 157 GFNTSCLRDVDTNEKIVLPSAEDV--ATEKTQKSLFDGIEKFDSSQLKHTETQEK 315
G N + V+ EK+ S D A EK Q+ L D +EK + E +EK
Sbjct: 169 GHNNYGVPRVNHREKLKFESDFDFEKANEKFQEVLVDNLEKLNIEDKAEPEVEEK 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,842,873
Number of Sequences: 27780
Number of extensions: 148057
Number of successful extensions: 537
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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