Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_J02
         (385 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358419-1|AAQ88785.1| 1137|Homo sapiens PLSS3001 protein.             28   8.9  
AL834531-1|CAD39187.1|  236|Homo sapiens hypothetical protein pr...    28   8.9  
AL355987-16|CAI12694.1| 1108|Homo sapiens MAM domain containing ...    28   8.9  
AL355987-15|CAM14253.1| 1153|Homo sapiens MAM domain containing ...    28   8.9  

>AY358419-1|AAQ88785.1| 1137|Homo sapiens PLSS3001 protein.
          Length = 1137

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 74  LRIARREQKLKEHGASSCISGKRGRRCCNIWH--WGSVDSISGSHARFQL 217
           LR+A R +  + H  S   SG +G R    WH  W ++    GSHA++QL
Sbjct: 660 LRLAMRREGEETHLWSR--SGTQGNR----WHEAWATLSHQPGSHAQYQL 703


>AL834531-1|CAD39187.1|  236|Homo sapiens hypothetical protein
           protein.
          Length = 236

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 74  LRIARREQKLKEHGASSCISGKRGRRCCNIWH--WGSVDSISGSHARFQL 217
           LR+A R +  + H  S   SG +G R    WH  W ++    GSHA++QL
Sbjct: 15  LRLAMRREGEETHLWSR--SGTQGNR----WHEAWATLSHQPGSHAQYQL 58


>AL355987-16|CAI12694.1| 1108|Homo sapiens MAM domain containing 4
           protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 74  LRIARREQKLKEHGASSCISGKRGRRCCNIWH--WGSVDSISGSHARFQL 217
           LR+A R +  + H  S   SG +G R    WH  W ++    GSHA++QL
Sbjct: 631 LRLAMRREGEETHLWSR--SGTQGNR----WHEAWATLSHQPGSHAQYQL 674


>AL355987-15|CAM14253.1| 1153|Homo sapiens MAM domain containing 4
           protein.
          Length = 1153

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 74  LRIARREQKLKEHGASSCISGKRGRRCCNIWH--WGSVDSISGSHARFQL 217
           LR+A R +  + H  S   SG +G R    WH  W ++    GSHA++QL
Sbjct: 676 LRLAMRREGEETHLWSR--SGTQGNR----WHEAWATLSHQPGSHAQYQL 719


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,417,659
Number of Sequences: 237096
Number of extensions: 943655
Number of successful extensions: 1803
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1803
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)