Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_I06
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 151 6e-38
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 109 3e-25
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 103 2e-23
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 103 3e-23
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 103 3e-23
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 64 2e-11
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 44 1e-05
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 29 0.77
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 27 1.8
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 27 2.4
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 27 3.1
SPAC3G9.15c |fcf2||rRNA processing protein Fcf2 |Schizosaccharom... 27 3.1
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 3.1
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 27 3.1
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 25 7.2
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 25 9.5
SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin Nup132|Schizosa... 25 9.5
SPAC1093.02 |||pyridoxamine 5'-phosphate oxidase |Schizosaccharo... 25 9.5
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 151 bits (367), Expect = 6e-38
Identities = 69/98 (70%), Positives = 86/98 (87%)
Frame = +1
Query: 262 SEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKR 441
+E V+G VIGIDLGTT SC+A+MEG+TPKV+ N+EG+RTTPS VAF+K+GERLVG+ AKR
Sbjct: 45 NEKVKGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKR 104
Query: 442 QAVTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVV 555
QAV N NTF+ATKRLIGRRF +PEVQ+D+K + YK+V
Sbjct: 105 QAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIV 142
Score = 46.0 bits (104), Expect = 5e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 563 SNGDAWVQGTDGKVYSPSQIGAFVLIKMKE 652
SNGDAW++ GK YSPSQIG F+L KM+E
Sbjct: 145 SNGDAWLEAR-GKTYSPSQIGGFILSKMRE 173
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 109 bits (262), Expect = 3e-25
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = +1
Query: 262 SEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKR 441
SE GA IGIDLGTT SCVAV E +++ N +G+RTTPS VAF+ E ERLVG AK
Sbjct: 2 SEVYEGA-IGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFT-ETERLVGDAAKN 59
Query: 442 QAVTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVV 555
QA N NT + KRLIGRR++DPE QKD+K+ +KV+
Sbjct: 60 QAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVI 97
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 103 bits (248), Expect = 2e-23
Identities = 49/90 (54%), Positives = 63/90 (70%)
Frame = +1
Query: 286 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 465
IGIDLGTT SCV +++ N +G+RTTPS+VAF+ + ERL+G AK Q N N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 466 TFYATKRLIGRRFDDPEVQKDMKNLSYKVV 555
T + KRLIGR+FDDPEVQ DMK+ +KV+
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVI 93
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 103 bits (246), Expect = 3e-23
Identities = 49/90 (54%), Positives = 63/90 (70%)
Frame = +1
Query: 286 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 465
IGIDLGTT SCV +++ N +G+RTTPS+VAF+ + ERL+G AK Q N N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 466 TFYATKRLIGRRFDDPEVQKDMKNLSYKVV 555
T + KRLIGRRF+DPEVQ DMK+ +KV+
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVI 93
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 103 bits (246), Expect = 3e-23
Identities = 50/93 (53%), Positives = 67/93 (72%)
Frame = +1
Query: 277 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 456
G VIGIDLGTT SCVAVM+ +++ N +G+R TPS+VAF+ E ERLVG AK QA +N
Sbjct: 35 GTVIGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFT-EDERLVGEAAKNQAPSN 93
Query: 457 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVV 555
NT + KRLIGR+FD+ + KD+K+ + +V
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIV 126
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 64.1 bits (149), Expect = 2e-11
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +1
Query: 274 RGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVT 453
R V+GID G + + +AV + V+ N +R+TPS V++ E R +G AK +
Sbjct: 4 RTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYG-ERSRFLGEAAKSAEAS 62
Query: 454 NSGNTFYATKRLIGRRFDDPEVQKDMKN 537
N NT + KRL GR +DDPE+ KD+++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEI-KDIES 89
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 44.4 bits (100), Expect = 1e-05
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 283 VIGIDLGTTNSCVAV-MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 459
VIGI G NS +A +GKT V+ N EG+R PS +++ + E G+ A+ Q V N+
Sbjct: 26 VIGISFGNQNSSIAFNRDGKT-DVLANEEGNRQIPSILSYHGDQE-YHGVQARGQLVRNA 83
Query: 460 GNTFYATKRLIGRRFDD 510
N+ + L+G+ D+
Sbjct: 84 DNSVTNFRDLLGKSHDE 100
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 28.7 bits (61), Expect = 0.77
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -2
Query: 374 REPSLFSTTLGVLPSMTATHEFVVPRSIPMTAPRTPSDLFLNCTPCRW*IGTV 216
+EP S T PS + P+ PRT D+ +PC+ +GT+
Sbjct: 548 KEPEESSITPTTPPSFNVGESLSRRSASPLQHPRTSPDMLDKTSPCKRGLGTI 600
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/35 (25%), Positives = 23/35 (65%)
Frame = -1
Query: 549 FV*QILHVLLHFGIVESTSDQSLRRVKRVTAIRDR 445
F+ ++L ++ +GI+++T +L R +TA++ +
Sbjct: 106 FIFELLDEMIDYGIIQTTEPDALARSVSITAVKKK 140
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 345 GCLALHDGNARVCRAQIDSNDGSTNT 268
G +A+ + RV Q+DSNDGS +T
Sbjct: 277 GAVAIRNPYIRVVGIQMDSNDGSKST 302
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 505 DDPEVQKDMKNLSY--KVVRGFEWRRLGARY*WQSI 606
DD E++K + Y K+VR EW + GA+ W+++
Sbjct: 1134 DDRELEKRLHRGPYNSKIVRTGEWVKDGAKMGWRNL 1169
>SPAC3G9.15c |fcf2||rRNA processing protein Fcf2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 151 GLSSDLYTQRNFSSILKSNATPTVPIYQRH 240
GL D + + S I ++ PTVPIY+ H
Sbjct: 65 GLKKDELVENSESYINDASFEPTVPIYESH 94
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -3
Query: 196 KLTKNFSAYTSLNLIRCTLKPFGRMPASRSTSLSRIKILY 77
KL K+F +T LNL++C + M ++++ ++ LY
Sbjct: 603 KLNKDFDDFTPLNLLKCV--NYSLMEFQKNSTFDMLEKLY 640
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2
Query: 515 SGSSNRRPINLFVA*NVLPLFVTACRLAGIPTRRSP 408
SG+ NRRPI+ V N+ P +T R A P SP
Sbjct: 523 SGNQNRRPISFPVISNMQP-NITNVRSASAPLCSSP 557
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 496 RRFDDPEVQKDMKNLSYKVVRGFEWRRLGARY 591
R F D D K + GF+WR GA+Y
Sbjct: 417 REFLDSRGLTDRKVGDLGPIYGFQWRHFGAQY 448
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 25.0 bits (52), Expect = 9.5
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 187 SSILKSNATPTVPIYQRHGVQFRNKSEGVRGAVIGIDLGTTNSCVAVM-EGKTPKVVENS 363
+ IL T VP+ + V N+ + A I+ + A E K+ E
Sbjct: 108 AKILIETGTKDVPVGKPLAVTVENEGDVAAMADFTIEDSSAKEPSAKSGEEKSAPSSEKQ 167
Query: 364 EGSRTTPSHVAFSKEGERLVGMPAKRQ 444
++PS+V+ + G+R+ P R+
Sbjct: 168 SKETSSPSNVSGEERGDRVFASPLARK 194
>SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin
Nup132|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1162
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -1
Query: 645 IFINTNAPIWLGEYTLPSVPCTQASPF 565
IF++T LG+Y++P+ C A+P+
Sbjct: 411 IFMSTCYKYVLGKYSIPTESCFIATPY 437
>SPAC1093.02 |||pyridoxamine 5'-phosphate oxidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -1
Query: 528 VLLHFGIVESTSDQSLRRVKRVTAIRDRLPFGGHSDQTLALFREGHMGGSRPRAFTVFHH 349
VL + E+T D+ ++ + T RLP G S + + L H R F +F +
Sbjct: 38 VLFNQWFQEATDDEGIKSPESTTLSTARLPSGRVSSRLVLLKELDH------RGFIIFTN 91
Query: 348 LG 343
LG
Sbjct: 92 LG 93
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,947,907
Number of Sequences: 5004
Number of extensions: 63982
Number of successful extensions: 181
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -