Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_I05
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1020.07 |||haloacid dehalogenase-like hydrolase|Schizosaccha... 91 1e-19
SPAC4C5.01 |||haloacid dehalogenase-like hydrolase |Schizosaccha... 69 6e-13
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 31 0.11
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 28 1.0
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 27 2.4
SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyc... 27 3.1
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 26 5.5
SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces ... 26 5.5
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 25 7.2
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 25 9.5
>SPCC1020.07 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 91.1 bits (216), Expect = 1e-19
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Frame = +3
Query: 204 LFDMDGLILNTEDLYTVGFQKVASRYGK-KFTFELKSRIMGQQTREFAGNIIKYLDLPLT 380
LFDMDGL+++TE +YT + RY K F+ E+K+++MG+ ++E + + + + LT
Sbjct: 7 LFDMDGLLVDTESIYTKSTNIILKRYNKGPFSMEVKAKMMGRTSKEASRIFLDWSGIDLT 66
Query: 381 IEDFVSETRQIFEELFPQSEILPGVKKLIYHLNQHNIPMGLATSSSKESYELKTLKHQDL 560
E++++ R+ EL+ ++ LPGV L+ L NIP+ LATSS ++E K+ L
Sbjct: 67 CEEYIALQRETQAELWRHTKPLPGVMNLLSKLKSLNIPIALATSSDTHNFEKKSAHLSHL 126
Query: 561 FDLF 572
FD F
Sbjct: 127 FDHF 130
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 607 VKRGKPHPDIFIVA 648
V RGKPHPDI+ +A
Sbjct: 144 VGRGKPHPDIWFIA 157
>SPAC4C5.01 |||haloacid dehalogenase-like hydrolase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 246
Score = 68.9 bits (161), Expect = 6e-13
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +3
Query: 204 LFDMDGLILNTEDLYTVGFQKVASRYGKK-FTFELKSRIMGQQTREFAGNIIKYLDLPLT 380
LFDMDGL++++E +YT + RYGK +K+++MG+ A +I + ++P+T
Sbjct: 12 LFDMDGLLVDSETIYTKTTNLILDRYGKDPLPISVKAQMMGRPGSAAAKVVIDWSNIPMT 71
Query: 381 IEDFVSETRQIFEELFPQSEILPGVKKLIYHLNQHNIPMGLAT 509
+ FV E + I + + + +PG + LI +L+ H I +G+ T
Sbjct: 72 PQQFVDEQQVIRAKFWSSLKPMPGAESLINNLSNHGIDIGVCT 114
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 31.5 bits (68), Expect = 0.11
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 237 EDLYTVGFQKVASRYGKKFTFELKSRIMGQQTREFAGNIIKYLDLPLTIEDFVSE-TRQI 413
E+ YT F+K+ +YG+ F LK + G+ + G + + L T E+ S + +I
Sbjct: 480 EEQYTDFFKKLKEKYGEFFQNLLKKELTGKPESDLEGLRLVGVQLQATYENLKSNFSARI 539
Query: 414 FEEL 425
F +L
Sbjct: 540 FNQL 543
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 28.3 bits (60), Expect = 1.0
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +3
Query: 285 KKFTFEL-KSRIMGQQTREFAGNI-IKYLDLPLTIEDF--VSETRQIFEELFPQSEILPG 452
KK EL K ++ + R+ G I + YL+ T+ +F + ++ I E ++++
Sbjct: 845 KKSMGELYKMEMIHECPRQLFGQILVVYLNRERTLLNFYLIENSKTIDEATLQLTDLIQA 904
Query: 453 VKKLIYHLNQHNIP 494
+K IY+L N+P
Sbjct: 905 IKTGIYYLRMFNLP 918
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 282 RSARPLFETRPCINPQYLKLTH 217
R A P+F RP I P++LK H
Sbjct: 156 REASPVFNGRPPIPPEFLKSRH 177
>SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 126 TQVYWYFSYFIKIFENMTTFKPVTHVLFDMDGLILNTEDLY 248
T + + FSY FE T K VLFD G L ED Y
Sbjct: 141 TNLLYNFSYNANPFEFWVTRKSDGEVLFDTRGQKLVFEDQY 181
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 25.8 bits (54), Expect = 5.5
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 54 IVGTYLKRSKIIIVLFD*VHSVPFTQVYWYFSYFIKIFENMTTFKPVTHVLFDMDGLILN 233
++ TYLKR I F H+V + Y++ Y ++I +T F F L +
Sbjct: 1797 LLDTYLKRKFRSIKDFL-KHTVSYLYSYYFEDYELEIVSTLTMFLSNNLTWFRKSTLDVL 1855
Query: 234 TEDLYTVGFQK-VASRYG 284
E + FQK + S +G
Sbjct: 1856 KELFPLIDFQKPIYSEHG 1873
>SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +3
Query: 126 TQVYWYFSYFIKIFENMTTFKPVTHVLFDMD 218
++ +W ++ +K+F + T F P++ +L DM+
Sbjct: 290 SESFWIMAHCLKMFYDETEFLPLSGLLPDMN 320
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +2
Query: 275 ALRQKVHVRIKKSDNGTADERVCREHNKISRFASYNRRFCIRDTSNL 415
A R K+ ++KKSD +CR N + + +C+ D ++
Sbjct: 1454 AERAKIRSKMKKSDVVVTSYDICR--NDVDELVKIDWNYCVLDEGHV 1498
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 651 GGYDKYIGVWLP 616
GGY KY G W+P
Sbjct: 71 GGYGKYQGTWVP 82
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,667,536
Number of Sequences: 5004
Number of extensions: 55443
Number of successful extensions: 165
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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