Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_I02
         (511 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043...    32   0.31 
01_02_0021 + 10281611-10281997                                         28   3.8  
04_01_0598 - 7866098-7866349,7866382-7866486,7866969-7867238           28   5.0  
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140...    28   5.0  
06_03_0741 - 24016204-24016298,24016408-24016525,24016805-240169...    27   6.6  
01_06_0461 + 29553709-29554905,29555051-29555296,29555387-295554...    27   6.6  

>09_06_0147 +
           21195222-21195377,21195471-21195522,21196842-21204362,
           21204453-21205031,21205176-21205484,21205638-21205718,
           21205971-21206279,21207430-21207816,21207964-21208767,
           21208856-21209218,21209437-21209667,21209934-21210278,
           21210494-21210712,21210759-21210815,21210978-21211322,
           21211538-21211756,21211803-21211859,21212022-21212366,
           21212584-21212814,21213100-21213458
          Length = 4322

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +3

Query: 285 AWPSRRSPEEDWALTSSTSN*RAIEDPASSLLSKYT 392
           A+P ++ P ED    +STSN R  +D  S+  SK+T
Sbjct: 772 AFPQKQPPAEDLRFAASTSNRRYFDDQDSTKKSKHT 807


>01_02_0021 + 10281611-10281997
          Length = 128

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 208 GAGGILRIPSAGAEDQGHRYKGPREWLGRAVDHPRRIG 321
           G+GG + +   G  + G    GPRE L    DHP R G
Sbjct: 53  GSGGSVAV---GPHEHGSSAAGPREALPCCRDHPHRCG 87


>04_01_0598 - 7866098-7866349,7866382-7866486,7866969-7867238
          Length = 208

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +1

Query: 148 RCEESTRAKC---GGQRD--SFVQEGAGGILRIPSAGAEDQGHRYKGPREWLG 291
           R  ES R KC    G+R   S  Q+G  G++        ++G R+   R W+G
Sbjct: 156 RGRESARRKCVGDAGERGGKSETQDGGCGVISPFQVRGGEEGERWGNLRRWIG 208


>02_05_0699 +
           31013176-31013345,31013749-31013872,31013950-31014032,
           31014106-31014217,31014297-31014401,31014809-31014859,
           31015893-31015979,31016325-31016402,31016477-31016530,
           31016608-31016892
          Length = 382

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = -1

Query: 505 TLFKSLIKISKFAYNV-LKTKTYKQ--FARLQLISQTLFSRVYFDNKLEAGSSIALQFDV 335
           ++F+ + K S   Y+V +  K  K     R+Q  +++ F  +YF+ +   G S+ALQ D 
Sbjct: 159 SVFRKVEKQSAHFYSVDITDKEAKMGLVCRVQSTAKSKFKLLYFEPEENGGLSLALQEDS 218

Query: 334 DEVKAQSSSGDRRLG 290
            +    +S+G   LG
Sbjct: 219 VKTGKVTSAGMFFLG 233


>06_03_0741 - 24016204-24016298,24016408-24016525,24016805-24016903,
            24016992-24017117,24017200-24017277,24017366-24017554,
            24018186-24018338,24018785-24018898,24019576-24019761,
            24019845-24019970,24020053-24020248,24020338-24020438,
            24020533-24020610,24020707-24020952,24021063-24022253
          Length = 1031

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 330  KLKPNPPRVI--DGSAKPFSRSFIAMPLIFCSG 238
            K  P+PP+++  D   KP+SR + A P  +  G
Sbjct: 961  KSAPHPPQLLMSDSWTKPYSREYAAFPAAWLRG 993


>01_06_0461 + 29553709-29554905,29555051-29555296,29555387-29555464,
            29555557-29555657,29555745-29555940,29556022-29556147,
            29556231-29556416,29556921-29557034,29557522-29557674,
            29558287-29558475,29558568-29558645,29558728-29558853,
            29558942-29559040,29559315-29559432,29559531-29559625
          Length = 1033

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 330  KLKPNPPRVI--DGSAKPFSRSFIAMPLIFCSG 238
            K  P+PP+++  D   KP+SR + A P  +  G
Sbjct: 963  KSAPHPPQLLMSDSWTKPYSREYAAFPAAWLRG 995


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,710,163
Number of Sequences: 37544
Number of extensions: 265262
Number of successful extensions: 668
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)