Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_I01
         (493 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0598 + 34977063-34977220,34977957-34978101,34978362-349784...    57   9e-09
04_03_0967 + 21318974-21319140,21321677-21321821,21322045-213221...    48   5e-06
07_03_0129 + 13987100-13987572,13988128-13988321,13988474-13989051     27   8.2  

>03_06_0598 +
           34977063-34977220,34977957-34978101,34978362-34978481,
           34978640-34978774,34979138-34979213,34979398-34979450,
           34979594-34979695,34979848-34979964,34980170-34980228,
           34980810-34980984,34981628-34981762,34981855-34981953,
           34982143-34982251,34982981-34983093,34983206-34983265,
           34983821-34983835
          Length = 556

 Score = 56.8 bits (131), Expect = 9e-09
 Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
 Frame = +3

Query: 198 NGIVQPLLTDLYQITMAYAYWKSGKVM-MSLYLIYFSNNPF 317
           N +V PLLTDLYQ TMAYAYWK+GK +  +++ +YF  NPF
Sbjct: 23  NPMVTPLLTDLYQFTMAYAYWKAGKHLDRAVFDLYFRKNPF 63


>04_03_0967 +
           21318974-21319140,21321677-21321821,21322045-21322164,
           21322261-21322395,21322503-21322564,21322804-21322879,
           21323555-21323656,21323732-21323848,21324403-21324461,
           21324927-21325101,21325233-21325367,21325429-21325545,
           21325686-21325794,21325939-21326051,21326561-21326615,
           21326657-21326769
          Length = 599

 Score = 47.6 bits (108), Expect = 5e-06
 Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
 Frame = +3

Query: 189 ARQNGIVQPLLTDLYQITMAYAYWKSGK-VMMSLYLIYFSNNPF 317
           A  N +   LLTD YQ +MAYAYWK+GK    +++ +YF  NPF
Sbjct: 23  APTNPMATALLTDQYQFSMAYAYWKAGKHADRAVFDLYFRKNPF 66


>07_03_0129 + 13987100-13987572,13988128-13988321,13988474-13989051
          Length = 414

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
 Frame = +2

Query: 41  RYCSTPHDEITCFSC---CRDTK 100
           RYC+   D++TC  C   CR+T+
Sbjct: 124 RYCAKEDDDLTCVLCNANCRETR 146


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,931,336
Number of Sequences: 37544
Number of extensions: 158040
Number of successful extensions: 221
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)