Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_I01
         (493 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY214327-1|AAP69605.1|  525|Homo sapiens nicotinate phosphoribos...    41   0.002
AY214326-1|AAP69604.1|  538|Homo sapiens nicotinate phosphoribos...    41   0.002
AY214325-1|AAP69603.1|  567|Homo sapiens nicotinate phosphoribos...    41   0.002
AB242230-1|BAF75377.1|  538|Homo sapiens nicotinic acid phosphor...    41   0.002

>AY214327-1|AAP69605.1|  525|Homo sapiens nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 525

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +3

Query: 171 IADKQMARQNGIVQPLLTDLYQITMAYAYWKSGKVM-MSLYLIYFSNNPF 317
           +A +Q        +PLLTDLYQ TMA  YW++G+    + + ++F   PF
Sbjct: 1   MAAEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPF 50


>AY214326-1|AAP69604.1|  538|Homo sapiens nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 538

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +3

Query: 171 IADKQMARQNGIVQPLLTDLYQITMAYAYWKSGKVM-MSLYLIYFSNNPF 317
           +A +Q        +PLLTDLYQ TMA  YW++G+    + + ++F   PF
Sbjct: 1   MAAEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPF 50


>AY214325-1|AAP69603.1|  567|Homo sapiens nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 567

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +3

Query: 171 IADKQMARQNGIVQPLLTDLYQITMAYAYWKSGKVM-MSLYLIYFSNNPF 317
           +A +Q        +PLLTDLYQ TMA  YW++G+    + + ++F   PF
Sbjct: 1   MAAEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPF 50


>AB242230-1|BAF75377.1|  538|Homo sapiens nicotinic acid
           phosphoribosyltransferase protein.
          Length = 538

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +3

Query: 171 IADKQMARQNGIVQPLLTDLYQITMAYAYWKSGKVM-MSLYLIYFSNNPF 317
           +A +Q        +PLLTDLYQ TMA  YW++G+    + + ++F   PF
Sbjct: 1   MAAEQDPEARAAARPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPF 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,169,438
Number of Sequences: 237096
Number of extensions: 915967
Number of successful extensions: 1610
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1610
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)