Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_H17
         (616 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0511 + 14907475-14907933,14907948-14908178,14908520-149088...    28   5.1  
05_07_0063 - 27428056-27428184,27428321-27428460,27428698-274289...    28   6.8  
01_01_0471 - 3467275-3467351,3467526-3467895,3468258-3468555,346...    28   6.8  
05_02_0119 + 6793292-6793613,6795793-6795952,6796416-6796458,679...    27   8.9  

>05_03_0511 +
           14907475-14907933,14907948-14908178,14908520-14908855,
           14909571-14910126,14910217-14910424,14910519-14910885,
           14910988-14911110
          Length = 759

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -1

Query: 427 WISSCLSEGRPISPLPQSSTKRQNGSRIEYRYIRDWVLFYSAD 299
           ++   +S G P  P   S T+R+    +  R  R W L  S+D
Sbjct: 665 FLKPLISSGNPAGPFKISDTEREQMIELRDRVFRIWGLLRSSD 707


>05_07_0063 -
           27428056-27428184,27428321-27428460,27428698-27428926,
           27429231-27429281,27429411-27429636,27430230-27430300,
           27430466-27430585,27430671-27430865,27431088-27431152,
           27431232-27431322,27431607-27431707,27431767-27431817,
           27432076-27432177,27432406-27432510,27432600-27432663,
           27433023-27433151
          Length = 622

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 242 HKLLFSPRTVGLEITEKPQISRVKQDPIPYVPI 340
           H  ++SP  V L + + P +++V   P P +P+
Sbjct: 126 HLSIYSPNVVNLTLIDLPGLTKVAVGPFPDLPL 158


>01_01_0471 -
           3467275-3467351,3467526-3467895,3468258-3468555,
           3468680-3469734,3469823-3470467
          Length = 814

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 134 YLRWINIKTTLRGVTPKRVPN 196
           YLRW    T +R  TPKR+ N
Sbjct: 610 YLRWYRRSTRIRLCTPKRISN 630


>05_02_0119 +
           6793292-6793613,6795793-6795952,6796416-6796458,
           6797015-6797335
          Length = 281

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 427 WISSCLSEGRPISPLPQSSTK 365
           W+  CL E  PI+PLP   T+
Sbjct: 196 WLRPCLREAIPITPLPIGGTQ 216


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,059,312
Number of Sequences: 37544
Number of extensions: 231093
Number of successful extensions: 555
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)