Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_H08
         (461 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024501-11|AAB70366.2|  443|Caenorhabditis elegans Hypothetical...    28   2.8  
Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z74042-4|CAA98533.1|  265|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z68270-4|CAE46687.1|  755|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z68270-3|CAA92568.1|  769|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>AF024501-11|AAB70366.2|  443|Caenorhabditis elegans Hypothetical
           protein F39E9.1 protein.
          Length = 443

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
 Frame = +1

Query: 100 KRMWRSLKQILTADRALP-WPNEAVLYYSI-NAPPTFKPIKKYSDISGLPAPYMDRHSKL 273
           K+ W  + +IL  D   P W   A+ Y S+ N  P    +K        P P ++  +KL
Sbjct: 92  KKSW--ITKILGIDFLGPKWFKTAIFYISLSNCDPQIIRLKNIPS----PIPNVEEGAKL 145

Query: 274 YFSNAEEFATVRNLPMDITAGYLQLRGAN 360
           Y ++ ++   ++N+ +    G   L   N
Sbjct: 146 YLASNDDNGLLKNIQVQTAGGSFTLDQLN 174


>Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical
           protein C34C6.4 protein.
          Length = 599

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +1

Query: 154 WPNEAVLYYSI-NAPPTFKPIKKYSDISGLPAPYMDRHSKLYFSNAE 291
           W  E    ++  N  P FK  + YSD +G   PY   +  LY    +
Sbjct: 142 WEKEGASGWNYANCLPYFKKAETYSDATGPNDPYRGNNGPLYVKKGD 188


>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
           protein F58H1.1b protein.
          Length = 1145

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 176 IIQ*MLRQHSNLLKNIQTYQDYQHHIWIDTQN 271
           ++Q +    +N LK +QTY  YQ   WID  N
Sbjct: 839 VVQKVFATPNNDLKILQTYTLYQGLPWIDLDN 870


>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
           protein F58H1.1a protein.
          Length = 1143

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 176 IIQ*MLRQHSNLLKNIQTYQDYQHHIWIDTQN 271
           ++Q +    +N LK +QTY  YQ   WID  N
Sbjct: 837 VVQKVFATPNNDLKILQTYTLYQGLPWIDLDN 868


>Z74042-4|CAA98533.1|  265|Caenorhabditis elegans Hypothetical
           protein T11F9.5 protein.
          Length = 265

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +1

Query: 70  NKFIVKSGSK---KRMWRSLKQILTADRALPWPNEAVLYY 180
           NK +++ G     KR+ RS +Q L  D    WP   + Y+
Sbjct: 25  NKIVMRVGGSPETKRLERSKRQALRMDNEPRWPRGTINYF 64


>Z68270-4|CAE46687.1|  755|Caenorhabditis elegans Hypothetical
           protein ZC410.4b protein.
          Length = 755

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 122 FKDLHIRFLDPLFTMNLFSLVETIIF 45
           +K+ HI++L PL  +  + L+  IIF
Sbjct: 82  YKEYHIKYLFPLIFIMFYMLIGAIIF 107


>Z68270-3|CAA92568.1|  769|Caenorhabditis elegans Hypothetical
           protein ZC410.4a protein.
          Length = 769

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 122 FKDLHIRFLDPLFTMNLFSLVETIIF 45
           +K+ HI++L PL  +  + L+  IIF
Sbjct: 82  YKEYHIKYLFPLIFIMFYMLIGAIIF 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,469,398
Number of Sequences: 27780
Number of extensions: 219802
Number of successful extensions: 483
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)