Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_H06
(637 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 214 2e-55
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 214 2e-55
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 214 2e-55
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 214 2e-55
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 214 2e-55
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 214 2e-55
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 158 1e-38
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 157 3e-38
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 93 6e-19
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 214 bits (523), Expect = 2e-55
Identities = 99/151 (65%), Positives = 114/151 (75%)
Frame = +3
Query: 150 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYE 329
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 330 SRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQF 509
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 510 HNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 602
H+S I+FPLP RV + F KRP T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 73 MKAKGQLREYEVIGRKLP 126
MKA G LREY+V+GR LP
Sbjct: 1 MKASGTLREYKVVGRCLP 18
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 214 bits (523), Expect = 2e-55
Identities = 99/151 (65%), Positives = 114/151 (75%)
Frame = +3
Query: 150 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYE 329
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 330 SRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQF 509
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 510 HNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 602
H+S I+FPLP RV + F KRP T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 73 MKAKGQLREYEVIGRKLP 126
MKA G LREY+V+GR LP
Sbjct: 1 MKASGTLREYKVVGRCLP 18
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 214 bits (523), Expect = 2e-55
Identities = 99/151 (65%), Positives = 114/151 (75%)
Frame = +3
Query: 150 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYE 329
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 330 SRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQF 509
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 510 HNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 602
H+S I+FPLP RV + F KRP T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 73 MKAKGQLREYEVIGRKLP 126
MKA G LREY+V+GR LP
Sbjct: 1 MKASGTLREYKVVGRCLP 18
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 214 bits (523), Expect = 2e-55
Identities = 99/151 (65%), Positives = 114/151 (75%)
Frame = +3
Query: 150 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYE 329
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 330 SRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQF 509
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 510 HNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 602
H+S I+FPLP RV + F KRP T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 73 MKAKGQLREYEVIGRKLP 126
MKA G LREY+V+GR LP
Sbjct: 1 MKASGTLREYKVVGRCLP 18
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 214 bits (523), Expect = 2e-55
Identities = 99/151 (65%), Positives = 114/151 (75%)
Frame = +3
Query: 150 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYE 329
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 330 SRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQF 509
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 510 HNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 602
H+S I+FPLP RV + F KRP T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 73 MKAKGQLREYEVIGRKLP 126
MKA G LREY+V+GR LP
Sbjct: 1 MKASGTLREYKVVGRCLP 18
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 214 bits (523), Expect = 2e-55
Identities = 99/151 (65%), Positives = 114/151 (75%)
Frame = +3
Query: 150 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYE 329
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 330 SRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQF 509
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 510 HNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 602
H+S I+FPLP RV + F KRP T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 73 MKAKGQLREYEVIGRKLP 126
MKA G LREY+V+GR LP
Sbjct: 1 MKASGTLREYKVVGRCLP 18
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 158 bits (384), Expect = 1e-38
Identities = 73/110 (66%), Positives = 84/110 (76%)
Frame = +3
Query: 150 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYE 329
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE V NFGIWLR +
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETVYCGQVFEKSPLRVKNFGIWLRCD 85
Query: 330 SRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAA 479
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+ VE I A+
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMMVEEIAAS 135
Score = 33.1 bits (72), Expect = 0.85
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 73 MKAKGQLREYEVIGRKLP 126
MKA G LREY+V+GR+LP
Sbjct: 1 MKASGTLREYKVVGRRLP 18
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 157 bits (381), Expect = 3e-38
Identities = 71/100 (71%), Positives = 79/100 (79%)
Frame = +3
Query: 303 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAA 482
NFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I +
Sbjct: 41 NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100
Query: 483 CRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 602
CRRP VKQFH+S I+FPLP RV + F KRP T+F
Sbjct: 101 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 93.5 bits (222), Expect = 6e-19
Identities = 44/66 (66%), Positives = 50/66 (75%)
Frame = +3
Query: 405 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYK 584
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 585 RPXTYF 602
RP T+F
Sbjct: 61 RPNTFF 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,272,910
Number of Sequences: 237096
Number of extensions: 1975357
Number of successful extensions: 4344
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4344
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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