Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_H04
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0973 - 21963754-21963936,21964089-21964383,21964504-219646... 40 0.001
10_08_0971 - 21949721-21949936,21950051-21950484,21950599-219507... 39 0.003
02_05_1039 + 33707196-33708815 34 0.11
04_04_1572 - 34527730-34527859,34528077-34528136,34528253-345283... 32 0.46
07_03_0051 - 12831167-12832188,12832245-12832512 30 1.9
05_05_0106 + 22435192-22435614,22436880-22436968,22437617-224378... 29 2.5
09_04_0222 + 15825878-15826451,15826542-15827017 29 3.3
08_01_0840 - 8213932-8214414 29 3.3
12_01_0377 - 2939384-2939505,2939629-2939695,2940324-2940543,294... 29 4.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 4.3
10_08_1058 + 22608852-22609172,22609257-22610651 28 5.7
10_01_0311 + 3441911-3443035 28 5.7
02_01_0695 - 5202091-5202498,5204103-5204588 28 5.7
12_02_0305 - 17235832-17236379,17237345-17237444 28 7.5
11_02_0111 + 8396304-8396378,8396697-8397113,8397220-8397483,839... 28 7.5
10_01_0144 - 1705429-1706250 28 7.5
08_02_0168 - 13640894-13641973 28 7.5
06_03_0294 - 19221962-19222194,19222675-19222697,19223191-19223270 28 7.5
06_01_0721 - 5255422-5255790,5256287-5256660,5256845-5257192,525... 28 7.5
05_06_0124 - 25822176-25822633,25822738-25825420 28 7.5
11_02_0112 + 8447754-8447828,8448352-8448514,8448680-8448768,844... 27 9.9
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 27 9.9
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 27 9.9
03_06_0557 + 34704990-34705400,34706271-34706485,34707142-347073... 27 9.9
>10_08_0973 -
21963754-21963936,21964089-21964383,21964504-21964616,
21964729-21964913,21965054-21965201,21965297-21965575,
21965657-21965761,21965936-21966178,21966426-21966486,
21966734-21966792
Length = 556
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 471 PPYPNGWFAVAETRELKVGSVLSIDALGXNLCVYRGEDGLXRCVDAYCPHLGANLAVG 644
P N W+ VA + +LK +++ ID ++RG+DG CV C H L +G
Sbjct: 229 PSLKNFWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLG 286
>10_08_0971 -
21949721-21949936,21950051-21950484,21950599-21950791,
21950909-21951007,21951114-21951191,21951275-21951669,
21954317-21954482,21954840-21954927,21955015-21955127,
21955242-21955426,21955840-21955987,21956071-21956349,
21956425-21956529,21956892-21957137,21957367-21957408,
21957539-21957613
Length = 953
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 471 PPYPNGWFAVAETRELKVGSVLSIDALGXNLCVYRGEDGLXRCVDAYCPHLGANLAVG 644
P N W+ V + +LK +++ ID ++RG+DG CV C H L +G
Sbjct: 229 PNLKNFWYPVVFSGDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLG 286
>02_05_1039 + 33707196-33708815
Length = 539
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 489 WFAVAETRELKVGSVLSIDALGXNLCVYRGEDGLXRCVDAYCPHLGANLAVGGTV 653
W+ + +E+ + L + L +YR G+ RC + CPH A L+ G V
Sbjct: 89 WYPLYLAKEVPDDAALPLTVFDRQLVLYRDAAGVLRCHEDRCPHRLAKLSEGQLV 143
>04_04_1572 -
34527730-34527859,34528077-34528136,34528253-34528375,
34528506-34528960,34529343-34529876,34530638-34531501
Length = 721
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 279 YILILTLMFAFSAILYVIYKS-YISPVFYKKELTEVGFDHIPQG 407
Y+L+L + +S LYV Y S Y+ + ++ VGF H+ G
Sbjct: 232 YVLVLLVTGRYSQRLYVAYNSTYVLGMLLAMQIRFVGFQHVQSG 275
>07_03_0051 - 12831167-12832188,12832245-12832512
Length = 429
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 144 ITEAVSSNTACPDTGPKAETTNIFLLLQKNITIESSKHVFSSIVEYIL-ILTLMFAFSAI 320
+ + NT C D K + T + + N+ I S K+++S+I+E T+ + +
Sbjct: 43 VVDGFMRNTNCDDPELKEKLTRLCTVPDPNLIICSYKYIYSTIIELACKTTTVKTRYVVM 102
Query: 321 LYVIYKSY 344
I KSY
Sbjct: 103 SEEILKSY 110
>05_05_0106 +
22435192-22435614,22436880-22436968,22437617-22437814,
22438475-22438679,22438749-22438916,22439095-22439262,
22439344-22439534,22440776-22440879,22441285-22441298
Length = 519
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +1
Query: 397 YLKVRTRGGGSVAPKPPDGWAANCPLPTPMGGSRSPKQGSLKLAASSLSMPWVXI-CACT 573
Y ++ GG P P AA L GGS G A++S + W + C C
Sbjct: 6 YSRLGRLGGAPSPPPVPPAVAAVASLQRGGGGSGRRTPGKGGSASASAAAGWTGVGCGCA 65
Query: 574 AVRTA 588
A R A
Sbjct: 66 ARRAA 70
>09_04_0222 + 15825878-15826451,15826542-15827017
Length = 349
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -2
Query: 547 ASIERTLPTLSSLVSATANHPLXXXXGNLLPIRLEAWARLIRLPLSGP 404
A+ LP + A A PL LP+ + W RLPLS P
Sbjct: 14 AAARLLLPVSGAARGAAARLPLPEPPCTRLPLPEQPWGTAARLPLSEP 61
>08_01_0840 - 8213932-8214414
Length = 160
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 466 CPLPTPMGGSRSPKQGSLKL-AASSLSMPWVXICA-CTAVRTAXPGAWTRTVRIW 624
C P GG S SL L +A L++P + C A RTA G W VR W
Sbjct: 32 CDDPPKPGGLCS--NASLPLPSAPDLALPLPELTGVCAAARTAVVGRWEAEVRRW 84
>12_01_0377 -
2939384-2939505,2939629-2939695,2940324-2940543,
2940655-2940731,2940813-2940878,2940970-2941018,
2941131-2941181,2941262-2941314,2941432-2941486,
2941563-2941651,2941742-2941827,2941933-2941989,
2942086-2942275,2943847-2944005
Length = 446
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 460 ANCPLPTPMGGSRSPKQGSLKLAASSLSMPWVXICACTAVRTAXP 594
A P+PTP+ G S K A S P +CA + P
Sbjct: 81 AGSPVPTPLSGKGSKAFAKSKAAKGQKSCPQTPLCASSPGNPVTP 125
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 418 GGGSVAPKPPDGWAANCPLPTPMGG 492
G G+ P PP G P P P+GG
Sbjct: 1105 GAGAPPPPPPPGGITGVPPPPPIGG 1129
>10_08_1058 + 22608852-22609172,22609257-22610651
Length = 571
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 228 FGVAEKCLLFLLSVRCRGTPCSKRRLP 148
FG+A CLL + TPC + RLP
Sbjct: 222 FGIATLCLLIASAAFLAATPCYRVRLP 248
>10_01_0311 + 3441911-3443035
Length = 374
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +1
Query: 418 GGGSVAPKP--PDGWAANCPLPTPMGG--SRSPKQGSL 519
G G+VAP P G AA PLP MGG + +P G+L
Sbjct: 255 GAGAVAPLPGAAGGDAAAAPLPGDMGGDAALAPLPGAL 292
>02_01_0695 - 5202091-5202498,5204103-5204588
Length = 297
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/70 (24%), Positives = 29/70 (41%)
Frame = +1
Query: 409 RTRGGGSVAPKPPDGWAANCPLPTPMGGSRSPKQGSLKLAASSLSMPWVXICACTAVRTA 588
+ GGG P PP +++ P +R K+ + AA+ L+ + A A
Sbjct: 215 KAAGGGGCRPPPPPSASSSRPRRGGRRVARGDKEEDQEAAANILAFAAAAARSVPAASAA 274
Query: 589 XPGAWTRTVR 618
P ++ R R
Sbjct: 275 DPNSYRRRAR 284
>12_02_0305 - 17235832-17236379,17237345-17237444
Length = 215
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 430 VAPKPPDGWAANCPLPTPMGGSRSPKQGSLKL 525
VAP P A P PTP GGS+ P++ + L
Sbjct: 111 VAPSQPPTIAPTQP-PTPSGGSQCPRENVIAL 141
>11_02_0111 +
8396304-8396378,8396697-8397113,8397220-8397483,
8398237-8398608
Length = 375
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 440 LGATDPPPLVRTLRYMIEADFCQFL 366
+GAT PP + + + E DF QFL
Sbjct: 180 IGATTPPSVAKLYQNQFEKDFSQFL 204
>10_01_0144 - 1705429-1706250
Length = 273
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 423 RISRAQASRRMGSKLPPPYPNGW 491
+ R Q RR G LPPP P+GW
Sbjct: 50 KAGRQQGRRRWGL-LPPPTPDGW 71
>08_02_0168 - 13640894-13641973
Length = 359
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 74 ELNEIVVSNSNKQNGGSSTFSIRHHGSRLFEHGVPRHRTESRNNKH 211
E+ ++ + K +GG T R+HG + G P H+ S H
Sbjct: 217 EMQQVYTFDMQKSSGGDQT---RNHGDKNSNSGGPVHKKSSSQRHH 259
>06_03_0294 - 19221962-19222194,19222675-19222697,19223191-19223270
Length = 111
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = -2
Query: 598 HRXRPSSPRYTHKX*PRASIERTLPTLSSLVSATANHPLXXXXGNLLPIRLEAWARLIRL 419
HR P++P Y H+ R I TLS S +LP++ EA+ ++L
Sbjct: 11 HRATPAAPTYLHECALRILITEITGTLS--CSQALRVAFLLKIRIMLPVKREAYIAALKL 68
Query: 418 PLSGP 404
+ P
Sbjct: 69 RVVAP 73
>06_01_0721 -
5255422-5255790,5256287-5256660,5256845-5257192,
5257369-5257497,5257585-5257658,5257745-5257816,
5257901-5257969,5258059-5258130,5258208-5258279,
5258512-5258583,5258735-5258806,5258887-5258958,
5259050-5259121,5259203-5259274,5259427-5259498,
5259599-5259670,5259764-5259832,5260072-5260143,
5260428-5260499,5260579-5260650,5260919-5260990,
5261015-5261161,5261249-5261378,5262212-5262290
Length = 931
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 484 MGGSRSPKQGSLKLAASSLSMPWVXICACTAVRTAXPGAWTRT 612
+GG SP G LK S +C C + A GAWTR+
Sbjct: 77 LGGEISPAVGRLKGIVSMYGRRGGVLCCCLEMWLA--GAWTRS 117
>05_06_0124 - 25822176-25822633,25822738-25825420
Length = 1046
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 445 PDGWAANCPLPTPMGGSRSPKQGSLKLAASSLS 543
PDG+AA PL + SR+ G++ ++ +SLS
Sbjct: 501 PDGFAAGMPLLQELDLSRNQLSGAIPVSIASLS 533
>11_02_0112 +
8447754-8447828,8448352-8448514,8448680-8448768,
8448860-8449123,8449635-8449907
Length = 287
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 440 LGATDPPPLVRTLRYMIEADFCQFL 366
+GAT PP + + + E DF QFL
Sbjct: 125 IGATTPPMVTKLYQNQFEKDFLQFL 149
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 421 GGSVAPKPPDGWAANCPLPTPMGGSRSPKQGSLK 522
G S P PP N P P P+ G GS K
Sbjct: 786 GASGRPHPPSSKGLNAPAPPPLLGRGREATGSAK 819
>09_06_0048 + 20477076-20478547,20478643-20478722,20478880-20478893,
20480164-20481199,20481275-20481402,20481673-20481732,
20481774-20481878,20481971-20482055,20482315-20482470,
20482562-20482831,20482877-20483671,20483844-20483903,
20484062-20485134
Length = 1777
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +2
Query: 161 FEHGVPRHRTESRNNKHF----SATPKEYND*VIKTRIQFDR 274
F H +P SRN++HF S + Y+ +T QFDR
Sbjct: 1701 FSHSIPNDGYPSRNSRHFDRQNSGNERRYDRQNERTDRQFDR 1742
>03_06_0557 +
34704990-34705400,34706271-34706485,34707142-34707367,
34707447-34707532,34708030-34708121,34708232-34708471,
34709455-34709750
Length = 521
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 487 GGSRSPKQGSLKLAASSLSMPW 552
GGS P+ G + ASS S PW
Sbjct: 456 GGSAPPRDGDERTVASSSSTPW 477
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,374,540
Number of Sequences: 37544
Number of extensions: 449950
Number of successful extensions: 1856
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1852
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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