Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_H04
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK130369-1|BAC85335.1| 179|Homo sapiens protein ( Homo sapiens ... 33 1.2
BC108916-1|AAI08917.1| 258|Homo sapiens VENT homeobox homolog (... 31 3.6
BC108915-1|AAI08916.1| 258|Homo sapiens VENT homeobox homolog (... 31 3.6
AL445199-7|CAI17343.1| 258|Homo sapiens VENT homeobox homolog (... 31 3.6
AF288039-1|AAK83043.1| 258|Homo sapiens hemopoietic progenitor ... 31 3.6
AF068006-1|AAC82375.1| 258|Homo sapiens hemopoietic progenitor ... 31 3.6
U10554-1|AAB92675.1| 532|Homo sapiens vesicular acetylcholine t... 31 4.8
U09210-1|AAA20497.1| 532|Homo sapiens vesicular acetylcholine t... 31 4.8
BC007765-1|AAH07765.1| 532|Homo sapiens solute carrier family 1... 31 4.8
X99050-1|CAA67507.1| 648|Homo sapiens p63 (processed form) prot... 30 8.3
BC125081-1|AAI25082.1| 486|Homo sapiens G protein-coupled recep... 30 8.3
BC125080-1|AAI25081.1| 486|Homo sapiens G protein-coupled recep... 30 8.3
BC110848-1|AAI10849.1| 486|Homo sapiens G protein-coupled recep... 30 8.3
BC066643-1|AAH66643.1| 1202|Homo sapiens CASK interacting protei... 30 8.3
BC064837-1|AAH64837.1| 699|Homo sapiens UV radiation resistance... 30 8.3
BC006411-1|AAH06411.1| 538|Homo sapiens IL17RC protein protein. 30 8.3
AK222772-1|BAD96492.1| 699|Homo sapiens UV radiation resistance... 30 8.3
AF451976-1|AAL49757.1| 1202|Homo sapiens cask-interacting protei... 30 8.3
AB032965-1|BAA86453.1| 1124|Homo sapiens KIAA1139 protein protein. 30 8.3
AB012958-1|BAA90829.1| 699|Homo sapiens UVRAG protein. 30 8.3
>AK130369-1|BAC85335.1| 179|Homo sapiens protein ( Homo sapiens
cDNA FLJ26859 fis, clone PRS08290. ).
Length = 179
Score = 32.7 bits (71), Expect = 1.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 393 HIPQGPDKGRRISRAQASRRMGSKLPPP 476
H+P GP +GR R +AS R+ + PPP
Sbjct: 141 HVPAGPAEGRHQLRKKASGRVAAPQPPP 168
>BC108916-1|AAI08917.1| 258|Homo sapiens VENT homeobox homolog
(Xenopus laevis) protein.
Length = 258
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 388 SIIYLKVRTRGGGSVAPKPPDGWAANCPLPTPMGGSRSPKQG-SLKLAASSLSMP 549
S+ +L + G + P+P D + P P G+R P Q S+K AA S ++P
Sbjct: 19 SVDWLSQSSCSGPTHTPRPADFSLGSLPGPGQTSGAREPPQAVSIKEAAGSSNLP 73
>BC108915-1|AAI08916.1| 258|Homo sapiens VENT homeobox homolog
(Xenopus laevis) protein.
Length = 258
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 388 SIIYLKVRTRGGGSVAPKPPDGWAANCPLPTPMGGSRSPKQG-SLKLAASSLSMP 549
S+ +L + G + P+P D + P P G+R P Q S+K AA S ++P
Sbjct: 19 SVDWLSQSSCSGPTHTPRPADFSPGSLPGPGQTSGAREPPQAVSIKEAAGSSNLP 73
>AL445199-7|CAI17343.1| 258|Homo sapiens VENT homeobox homolog
(Xenopus laevis) protein.
Length = 258
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 388 SIIYLKVRTRGGGSVAPKPPDGWAANCPLPTPMGGSRSPKQG-SLKLAASSLSMP 549
S+ +L + G + P+P D + P P G+R P Q S+K AA S ++P
Sbjct: 19 SVDWLSQSSCSGPTHTPRPADFSLGSLPGPGQTSGAREPPQAVSIKEAAGSSNLP 73
>AF288039-1|AAK83043.1| 258|Homo sapiens hemopoietic progenitor
homeobox protein VENTX2 protein.
Length = 258
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 388 SIIYLKVRTRGGGSVAPKPPDGWAANCPLPTPMGGSRSPKQG-SLKLAASSLSMP 549
S+ +L + G + P+P D + P P G+R P Q S+K AA S ++P
Sbjct: 19 SVDWLSQSSCSGPTHTPRPADFSLGSLPGPGQTSGAREPPQAVSIKEAAGSSNLP 73
>AF068006-1|AAC82375.1| 258|Homo sapiens hemopoietic progenitor
homeobox protein VENTX2 protein.
Length = 258
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 388 SIIYLKVRTRGGGSVAPKPPDGWAANCPLPTPMGGSRSPKQG-SLKLAASSLSMP 549
S+ +L + G + P+P D + P P G+R P Q S+K AA S ++P
Sbjct: 19 SVDWLSQSSCSGPTHTPRPADFSLGSLPGPGQTSGAREPPQAVSIKEAAGSSNLP 73
>U10554-1|AAB92675.1| 532|Homo sapiens vesicular acetylcholine
transporter protein.
Length = 532
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 415 RGGGSVAPKPPDGWAANCPLPTPMGGS 495
RGGG + P+ W PLPTP S
Sbjct: 65 RGGGEGPTRTPEVWEPTLPLPTPANAS 91
>U09210-1|AAA20497.1| 532|Homo sapiens vesicular acetylcholine
transporter protein.
Length = 532
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 415 RGGGSVAPKPPDGWAANCPLPTPMGGS 495
RGGG + P+ W PLPTP S
Sbjct: 65 RGGGEGPTRTPEVWEPTLPLPTPANAS 91
>BC007765-1|AAH07765.1| 532|Homo sapiens solute carrier family 18
(vesicular acetylcholine), member 3 protein.
Length = 532
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 415 RGGGSVAPKPPDGWAANCPLPTPMGGS 495
RGGG + P+ W PLPTP S
Sbjct: 65 RGGGEGPTRTPEVWEPTLPLPTPANAS 91
>X99050-1|CAA67507.1| 648|Homo sapiens p63 (processed form)
protein.
Length = 648
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 378 EVGFDHIPQGPDKGRRISRAQASRRMGSKLPPPYPNGWFAVAETRELKVG 527
+VGF PDKG R + + R+ K PPP N A T +G
Sbjct: 489 DVGFSGGIPSPDKGHRKRASSENERLQYKTPPPSYNSALAQPVTTVPSMG 538
>BC125081-1|AAI25082.1| 486|Homo sapiens G protein-coupled
receptor, family C, group 5, member C protein.
Length = 486
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 414 KGRRISRAQASRRMGSKLPPPYPNGWFAVAE 506
+GR + Q +RR G KLP P P G + A+
Sbjct: 2 RGRGSQQQQPTRRQGQKLPSPSPAGKYESAQ 32
>BC125080-1|AAI25081.1| 486|Homo sapiens G protein-coupled
receptor, family C, group 5, member C protein.
Length = 486
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 414 KGRRISRAQASRRMGSKLPPPYPNGWFAVAE 506
+GR + Q +RR G KLP P P G + A+
Sbjct: 2 RGRGSQQQQPTRRQGQKLPSPSPAGKYESAQ 32
>BC110848-1|AAI10849.1| 486|Homo sapiens G protein-coupled
receptor, family C, group 5, member C protein.
Length = 486
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 414 KGRRISRAQASRRMGSKLPPPYPNGWFAVAE 506
+GR + Q +RR G KLP P P G + A+
Sbjct: 2 RGRGSQQQQPTRRQGQKLPSPSPAGKYESAQ 32
>BC066643-1|AAH66643.1| 1202|Homo sapiens CASK interacting protein 2
protein.
Length = 1202
Score = 29.9 bits (64), Expect = 8.3
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 400 LKVRTRGGGSVAPKPPDGWAANCPLPTPMGGSRSPKQGSLKLAASSLSMP 549
L+ R +G PK + P P P+ GS PK+G+ +LS P
Sbjct: 861 LRARRKGPPPPPPKRLSSVSGPSPEPPPLDGSPGPKEGATGPRRRTLSEP 910
>BC064837-1|AAH64837.1| 699|Homo sapiens UV radiation resistance
associated gene protein.
Length = 699
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 378 EVGFDHIPQGPDKGRRISRAQASRRMGSKLPPPYPNGWFAVAETRELKVG 527
+VGF PDKG R + + R+ K PPP N A T +G
Sbjct: 489 DVGFSGGIPSPDKGHRKRASSENERLQYKTPPPSYNSALAQPVTTVPSMG 538
>BC006411-1|AAH06411.1| 538|Homo sapiens IL17RC protein protein.
Length = 538
Score = 29.9 bits (64), Expect = 8.3
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +1
Query: 322 CMLYTSHISVLFSIKRN*QKSASIIYLKVRTRGGG----SVAPKPPDGW--AANCPLPTP 483
C+L+ + +S++ +K++ K + LK R GG ++ PP G A+ PLP+P
Sbjct: 460 CLLFAAALSLILLLKKDHAKGW-LRLLKQDVRSGGEWEQALGGGPPPGSQACASSPLPSP 518
Query: 484 MGGSRSPKQG 513
S S +QG
Sbjct: 519 SVFSGSGRQG 528
>AK222772-1|BAD96492.1| 699|Homo sapiens UV radiation resistance
associated gene variant protein.
Length = 699
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 378 EVGFDHIPQGPDKGRRISRAQASRRMGSKLPPPYPNGWFAVAETRELKVG 527
+VGF PDKG R + + R+ K PPP N A T +G
Sbjct: 489 DVGFSGGIPSPDKGHRKRASSENERLQYKTPPPSYNSALAQPVTTVPSMG 538
>AF451976-1|AAL49757.1| 1202|Homo sapiens cask-interacting protein 2
protein.
Length = 1202
Score = 29.9 bits (64), Expect = 8.3
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 400 LKVRTRGGGSVAPKPPDGWAANCPLPTPMGGSRSPKQGSLKLAASSLSMP 549
L+ R +G PK + P P P+ GS PK+G+ +LS P
Sbjct: 861 LRARRKGPPPPPPKRLSSVSGPSPEPPPLDGSPGPKEGATGPRRRTLSEP 910
>AB032965-1|BAA86453.1| 1124|Homo sapiens KIAA1139 protein protein.
Length = 1124
Score = 29.9 bits (64), Expect = 8.3
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 400 LKVRTRGGGSVAPKPPDGWAANCPLPTPMGGSRSPKQGSLKLAASSLSMP 549
L+ R +G PK + P P P+ GS PK+G+ +LS P
Sbjct: 783 LRARRKGPPPPPPKRLSSVSGPSPEPPPLDGSPGPKEGATGPRRRTLSEP 832
>AB012958-1|BAA90829.1| 699|Homo sapiens UVRAG protein.
Length = 699
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 378 EVGFDHIPQGPDKGRRISRAQASRRMGSKLPPPYPNGWFAVAETRELKVG 527
+VGF PDKG R + + R+ K PPP N A T +G
Sbjct: 489 DVGFSGGIPSPDKGHRKRASSENERLQYKTPPPSYNSALAQPVTTVPSMG 538
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,025,534
Number of Sequences: 237096
Number of extensions: 2312190
Number of successful extensions: 7200
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7188
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -