Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_H04
(656 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021261-1|AAX33409.1| 429|Drosophila melanogaster RE52861p pro... 82 7e-16
AB232987-1|BAE94193.1| 429|Drosophila melanogaster Rieske-domai... 82 7e-16
AY089390-1|AAL90128.1| 238|Drosophila melanogaster AT21479p pro... 35 0.085
AE014296-2883|AAF49361.1| 238|Drosophila melanogaster CG6485-PA... 35 0.085
BT022572-1|AAY54988.1| 536|Drosophila melanogaster IP11909p pro... 34 0.15
AE014134-3036|AAF53755.1| 539|Drosophila melanogaster CG10700-P... 33 0.26
J03177-1|AAA28535.1| 510|Drosophila melanogaster protein ( D.me... 29 4.2
BT023936-1|ABB36440.1| 510|Drosophila melanogaster RE06859p pro... 29 4.2
BT010029-1|AAQ22498.1| 426|Drosophila melanogaster RE03865p pro... 29 4.2
AE014297-4241|AAF56798.1| 510|Drosophila melanogaster CG10002-P... 29 4.2
BT023516-1|AAY84916.1| 534|Drosophila melanogaster IP11809p pro... 29 5.6
AE014134-2072|AAZ66459.1| 690|Drosophila melanogaster CG4970-PB... 29 7.3
AY128447-1|AAM75040.1| 547|Drosophila melanogaster LD38919p pro... 28 9.7
AE014298-2913|AAF49003.1| 547|Drosophila melanogaster CG14224-P... 28 9.7
AE014296-720|AAF47812.1| 320|Drosophila melanogaster CG12766-PA... 28 9.7
>BT021261-1|AAX33409.1| 429|Drosophila melanogaster RE52861p
protein.
Length = 429
Score = 81.8 bits (193), Expect = 7e-16
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = +3
Query: 462 KLPPPYPNGWFAVAETRELKVGSVLSIDALGXNLCVYRGEDGLXRCVDAYCPHLGANLAV 641
+LPPPYPNGW+ + ++ +LK G + LG +L ++R + + +DAYCPHLGANL +
Sbjct: 88 ELPPPYPNGWYGILKSSQLKAGEATCVSCLGEDLVIFRSKKDIVFILDAYCPHLGANLGI 147
Query: 642 GGTV 653
GG+V
Sbjct: 148 GGSV 151
>AB232987-1|BAE94193.1| 429|Drosophila melanogaster Rieske-domain
protein Neverland protein.
Length = 429
Score = 81.8 bits (193), Expect = 7e-16
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = +3
Query: 462 KLPPPYPNGWFAVAETRELKVGSVLSIDALGXNLCVYRGEDGLXRCVDAYCPHLGANLAV 641
+LPPPYPNGW+ + ++ +LK G + LG +L ++R + + +DAYCPHLGANL +
Sbjct: 88 ELPPPYPNGWYGILKSSQLKAGEATCVSCLGEDLVIFRSKKDIVFILDAYCPHLGANLGI 147
Query: 642 GGTV 653
GG+V
Sbjct: 148 GGSV 151
>AY089390-1|AAL90128.1| 238|Drosophila melanogaster AT21479p
protein.
Length = 238
Score = 35.1 bits (77), Expect = 0.085
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 551 QGIDREDAANFKLPCFGDREPPIGVGRGQFAAHPSGGLGA--TDPPP 417
+ +D + AN D+ PP G G+FA+ P GGL PPP
Sbjct: 175 EDLDEKSLANILADLRNDKLPPAGPRNGRFASEPKGGLTTLKIQPPP 221
>AE014296-2883|AAF49361.1| 238|Drosophila melanogaster CG6485-PA
protein.
Length = 238
Score = 35.1 bits (77), Expect = 0.085
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 551 QGIDREDAANFKLPCFGDREPPIGVGRGQFAAHPSGGLGA--TDPPP 417
+ +D + AN D+ PP G G+FA+ P GGL PPP
Sbjct: 175 EDLDEKSLANILADLRNDKLPPAGPRNGRFASEPKGGLTTLKIQPPP 221
>BT022572-1|AAY54988.1| 536|Drosophila melanogaster IP11909p
protein.
Length = 536
Score = 34.3 bits (75), Expect = 0.15
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +3
Query: 522 VGSVLSIDALGXNLCVYRGEDGLXRCVDAYCPHLGANLAVG 644
V SV++ DA G + + G+ R V A CPH GA LA G
Sbjct: 17 VTSVMAQDASGIPSILLVKQSGILRAVGAMCPHRGAPLAKG 57
>AE014134-3036|AAF53755.1| 539|Drosophila melanogaster CG10700-PA
protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.26
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 498 VAETRELKVGSVLSIDALGXNLCVYRGEDGLXRCVDAYCPHLGANLAVG 644
V E++ + +DA G + + G+ R V A CPH GA LA G
Sbjct: 12 VCHKLEVQENEMRQVDASGIPSILLVKQSGILRAVGAMCPHRGAPLAKG 60
>J03177-1|AAA28535.1| 510|Drosophila melanogaster protein (
D.melanogaster forkhead protein (fkh) gene, complete
cds. ).
Length = 510
Score = 29.5 bits (63), Expect = 4.2
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +1
Query: 418 GGGSVAPKPPDGWAANCPLPTPMGGSRSPKQGSLKLAASSLSMP 549
GGG P PP N P PT GGS SP S +S+ +P
Sbjct: 35 GGGGGGPPPPSN---NNPNPTSNGGSMSPLARS-AYTMNSMGLP 74
>BT023936-1|ABB36440.1| 510|Drosophila melanogaster RE06859p
protein.
Length = 510
Score = 29.5 bits (63), Expect = 4.2
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +1
Query: 418 GGGSVAPKPPDGWAANCPLPTPMGGSRSPKQGSLKLAASSLSMP 549
GGG P PP N P PT GGS SP S +S+ +P
Sbjct: 35 GGGGGGPPPPSN---NNPNPTSNGGSMSPLARS-AYTMNSMGLP 74
>BT010029-1|AAQ22498.1| 426|Drosophila melanogaster RE03865p
protein.
Length = 426
Score = 29.5 bits (63), Expect = 4.2
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +1
Query: 418 GGGSVAPKPPDGWAANCPLPTPMGGSRSPKQGSLKLAASSLSMP 549
GGG P PP N P PT GGS SP S +S+ +P
Sbjct: 35 GGGGGGPPPPSN---NNPNPTSNGGSMSPLARS-AYTMNSMGLP 74
>AE014297-4241|AAF56798.1| 510|Drosophila melanogaster CG10002-PA
protein.
Length = 510
Score = 29.5 bits (63), Expect = 4.2
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +1
Query: 418 GGGSVAPKPPDGWAANCPLPTPMGGSRSPKQGSLKLAASSLSMP 549
GGG P PP N P PT GGS SP S +S+ +P
Sbjct: 35 GGGGGGPPPPSN---NNPNPTSNGGSMSPLARS-AYTMNSMGLP 74
>BT023516-1|AAY84916.1| 534|Drosophila melanogaster IP11809p
protein.
Length = 534
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 579 EDGLXRCVDAYCPHLGANLAVG 644
+ G+ R V A CPH GA LA G
Sbjct: 34 QSGILRAVGAMCPHRGAPLAKG 55
>AE014134-2072|AAZ66459.1| 690|Drosophila melanogaster CG4970-PB
protein.
Length = 690
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 430 VAPKPPDGWAANCPLPTPMGGSRSPKQGSLKLAASSLSMP 549
+A P W+ + P+P P PKQ + S S+P
Sbjct: 67 IASTAPSVWSTSVPIPIPSSQRGMPKQNVRRSVVSISSLP 106
>AY128447-1|AAM75040.1| 547|Drosophila melanogaster LD38919p
protein.
Length = 547
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 418 GGGSVAPKPPDGWAANCPLPTPMGGSRSPKQGSL 519
GG P G PLP P GG+ S G++
Sbjct: 256 GGSGAGNNPQQGTENRNPLPNPWGGANSGTNGTV 289
>AE014298-2913|AAF49003.1| 547|Drosophila melanogaster CG14224-PA
protein.
Length = 547
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 418 GGGSVAPKPPDGWAANCPLPTPMGGSRSPKQGSL 519
GG P G PLP P GG+ S G++
Sbjct: 256 GGSGAGNNPQQGTENRNPLPNPWGGANSGTNGTV 289
>AE014296-720|AAF47812.1| 320|Drosophila melanogaster CG12766-PA
protein.
Length = 320
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -2
Query: 307 ANIKVSIKIYSTIELNTCFDDSIVIFFWSSRKMFVVSAFGPVSGHAVFEETASVMADGK 131
AN K+ I++ IE++ D +I + +V+AF P+ H T + M DGK
Sbjct: 178 ANCKIK-PIHNQIEVHPALDQKKLIAL-CKKNGILVTAFSPLGRHNAELRTPTFMYDGK 234
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,820,855
Number of Sequences: 53049
Number of extensions: 736182
Number of successful extensions: 3089
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3070
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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