Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_G21
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z72505-3|CAA96610.1|  340|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U50301-11|AAB37048.1|  269|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z29443-2|CAA82581.1|  648|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z29443-1|CAA82576.1|  649|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical
           protein K04G2.10 protein.
          Length = 319

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 498 TLKEFYQKYNPPIRAHKHTCVGLGMEVIKRLKLLXKDF 611
           TLK   Q+YNPP  +++  C G   ++ K  +L+ + +
Sbjct: 91  TLKRSMQRYNPPQSSNQMYCPGCNRQIRKVQELMDERY 128


>Z72505-3|CAA96610.1|  340|Caenorhabditis elegans Hypothetical
           protein C50C10.4 protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -2

Query: 128 ETTLCPHLTVLYLTYPLFGWKPSEEDALFRSSLFV 24
           ET + P   VLYLT+P+FG K  +      SS+FV
Sbjct: 296 ETVMMPW--VLYLTHPMFGPKKQQLKPSGASSVFV 328


>U50301-11|AAB37048.1|  269|Caenorhabditis elegans Hypothetical
           protein F20D6.1 protein.
          Length = 269

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 28  NNELRKRASSSLGFQPNNGYVKYKTV 105
           N  +RK+ SS    +PN GY+ YK V
Sbjct: 56  NAAIRKKGSSDKSVKPNVGYMYYKLV 81


>Z29443-2|CAA82581.1|  648|Caenorhabditis elegans Hypothetical
           protein T07C4.3b protein.
          Length = 648

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
 Frame = +3

Query: 384 ELVAKAEVLLSRLVVSENYDS----ISNFLTHYDAYMASPIDTLKEFYQKYNPPIRAHKH 551
           E + KA+ +++ +V++E+ D+    +   ++H DA ++   +  +E      PP+ A + 
Sbjct: 269 EKLFKAQEIVAPIVLTESIDAAFEAVIQSVSHADATLSMTQNASEEAKVHATPPLPAERK 328

Query: 552 TCVGLGMEVIKRLKLLXKDF 611
           T V   +   K +K L + F
Sbjct: 329 TMVSAELANGKPIKHLIEKF 348


>Z29443-1|CAA82576.1|  649|Caenorhabditis elegans Hypothetical
           protein T07C4.3a protein.
          Length = 649

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
 Frame = +3

Query: 384 ELVAKAEVLLSRLVVSENYDS----ISNFLTHYDAYMASPIDTLKEFYQKYNPPIRAHKH 551
           E + KA+ +++ +V++E+ D+    +   ++H DA ++   +  +E      PP+ A + 
Sbjct: 270 EKLFKAQEIVAPIVLTESIDAAFEAVIQSVSHADATLSMTQNASEEAKVHATPPLPAERK 329

Query: 552 TCVGLGMEVIKRLKLLXKDF 611
           T V   +   K +K L + F
Sbjct: 330 TMVSAELANGKPIKHLIEKF 349


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,065,478
Number of Sequences: 27780
Number of extensions: 274963
Number of successful extensions: 824
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)