Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_G16
         (538 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0120 - 957365-957552,957642-957780,957847-957970,958398-95...   122   1e-28
08_01_0119 - 951492-951679,951780-951918,952023-952095,952196-95...   122   1e-28
07_03_0978 + 23099690-23100108,23100530-23100564,23100868-231009...   109   2e-24
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416    107   6e-24
06_03_1379 - 29709532-29709843,29709951-29710112,29710193-297110...    27   9.5  

>08_01_0120 -
           957365-957552,957642-957780,957847-957970,958398-958486
          Length = 179

 Score =  122 bits (295), Expect = 1e-28
 Identities = 56/67 (83%), Positives = 61/67 (91%)
 Frame = +1

Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
           I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK   
Sbjct: 113 ILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTK 172

Query: 457 VLPPNWK 477
            LPP WK
Sbjct: 173 KLPPTWK 179



 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 26/41 (63%), Positives = 30/41 (73%)
 Frame = +3

Query: 153 VKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 275
           V+E I K  KKG  PSQIGV+LRD HG+  V+ VTG KILR
Sbjct: 72  VEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILR 112


>08_01_0119 -
           951492-951679,951780-951918,952023-952095,952196-952218
          Length = 140

 Score =  122 bits (295), Expect = 1e-28
 Identities = 56/67 (83%), Positives = 61/67 (91%)
 Frame = +1

Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
           I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK   
Sbjct: 74  ILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTK 133

Query: 457 VLPPNWK 477
            LPP WK
Sbjct: 134 KLPPTWK 140



 Score = 70.5 bits (165), Expect = 8e-13
 Identities = 37/74 (50%), Positives = 45/74 (60%)
 Frame = +3

Query: 54  MGRMHAPG*GYLPXRRCLTAAVSXTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHG 233
           MGRMH+ G G +            +W+K  A DV+E I K  KKG  PSQIGV+LRD HG
Sbjct: 1   MGRMHSRGKG-ISSSAIPYKRTPPSWVKTAAADVEEMIMKAAKKGQMPSQIGVVLRDQHG 59

Query: 234 VAQVRFVTGKKILR 275
           +  V+ VTG KILR
Sbjct: 60  IPLVKSVTGSKILR 73


>07_03_0978 +
           23099690-23100108,23100530-23100564,23100868-23100926,
           23101269-23101310,23102003-23102065,23102172-23102253,
           23102570-23102609,23102657-23102753
          Length = 278

 Score =  109 bits (261), Expect = 2e-24
 Identities = 48/67 (71%), Positives = 59/67 (88%)
 Frame = +1

Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
           ++K+ GLAP++PEDLY+LIKKAVAMRKHLERNRKDKD+KFRLILVESR+HRL RYY+   
Sbjct: 74  VLKSRGLAPEVPEDLYFLIKKAVAMRKHLERNRKDKDTKFRLILVESRVHRLTRYYRLAK 133

Query: 457 VLPPNWK 477
            +P  +K
Sbjct: 134 KIPAFFK 140



 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
 Frame = +3

Query: 54  MGRMHAPG*GY----LPXRRCLTAAVSXTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLR 221
           MGRMH+ G G     LP RR   A     W+K +A +V+E I ++ KKG  PSQIG +LR
Sbjct: 1   MGRMHSSGKGMSCSVLPYRRAAPA-----WVKTSASEVEEMIVRVAKKGQLPSQIGAILR 55

Query: 222 DSHGVAQVRFVTGKKILR 275
           D+H V   + VTG KILR
Sbjct: 56  DAHAVPLAQGVTGGKILR 73


>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
          Length = 218

 Score =  107 bits (257), Expect = 6e-24
 Identities = 51/64 (79%), Positives = 55/64 (85%)
 Frame = +1

Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
           I+KA GLAP + EDLY+LIKKAVA+RKHLERNRKDKDS FRLILVESRIHRL RYYK   
Sbjct: 131 ILKAHGLAPKILEDLYFLIKKAVAIRKHLERNRKDKDSSFRLILVESRIHRLVRYYKRTK 190

Query: 457 VLPP 468
            LPP
Sbjct: 191 KLPP 194



 Score = 40.7 bits (91), Expect = 7e-04
 Identities = 19/41 (46%), Positives = 25/41 (60%)
 Frame = +3

Query: 150 DVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKIL 272
           +V+E I K  K G   SQIGV+LR  HG+  V+ +   KIL
Sbjct: 89  EVEEMIMKAAKMGQMSSQIGVVLRHQHGIPLVKSIASSKIL 129


>06_03_1379 -
           29709532-29709843,29709951-29710112,29710193-29711086,
           29712741-29712812,29714106-29714210,29714820-29714900
          Length = 541

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 304 DLPEDLYYLIKK-AVAMRKHLERNRKDKDSKFRL 402
           DLPE    L++  AVA R  LE++R   D+ FR+
Sbjct: 24  DLPEQQPQLMENVAVAKRSRLEQHRTLSDNSFRV 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,081,422
Number of Sequences: 37544
Number of extensions: 246152
Number of successful extensions: 607
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)