BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_G08
(653 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118647-1|AAM50016.1| 1226|Drosophila melanogaster SD05267p pro... 31 1.0
AE014296-2615|AAF49551.3| 1226|Drosophila melanogaster CG5841-PA... 31 1.0
BT015177-1|AAT94406.1| 1462|Drosophila melanogaster SD19814p pro... 30 3.2
AY069180-1|AAL39325.1| 1263|Drosophila melanogaster GH22734p pro... 30 3.2
AY058401-1|AAL13630.1| 922|Drosophila melanogaster GH16858p pro... 30 3.2
AE013599-1186|AAF58740.2| 1462|Drosophila melanogaster CG30015-P... 30 3.2
AE013599-1185|AAF58741.2| 1462|Drosophila melanogaster CG30015-P... 30 3.2
AY051888-1|AAK93312.1| 503|Drosophila melanogaster LD37690p pro... 29 4.2
AE014297-4320|AAF56856.1| 503|Drosophila melanogaster CG11877-P... 29 4.2
BT024236-1|ABC86298.1| 959|Drosophila melanogaster LD10772p pro... 29 7.3
AY119108-1|AAM50968.1| 647|Drosophila melanogaster RE09079p pro... 29 7.3
AE014297-360|AAF51949.1| 959|Drosophila melanogaster CG10979-PA... 29 7.3
>AY118647-1|AAM50016.1| 1226|Drosophila melanogaster SD05267p
protein.
Length = 1226
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 368 LCETMASCYKKRRLEHEESEDKITVTDKSMNSRTHSG 478
LC+T+ CY +R+ + E + T S +R SG
Sbjct: 877 LCKTLVKCYNERKTDDSELPGNVAGTSSSARARAASG 913
>AE014296-2615|AAF49551.3| 1226|Drosophila melanogaster CG5841-PA
protein.
Length = 1226
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 368 LCETMASCYKKRRLEHEESEDKITVTDKSMNSRTHSG 478
LC+T+ CY +R+ + E + T S +R SG
Sbjct: 877 LCKTLVKCYNERKTDDSELPGNVAGTSSSARARAASG 913
>BT015177-1|AAT94406.1| 1462|Drosophila melanogaster SD19814p
protein.
Length = 1462
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 422 SEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEG 529
+ D + V DKS ++ +H + R+ +K ++ NEG
Sbjct: 625 ARDAVQVPDKSRSATSHEQHIQETRQTIKREIHNEG 660
>AY069180-1|AAL39325.1| 1263|Drosophila melanogaster GH22734p
protein.
Length = 1263
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 422 SEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEG 529
+ D + V DKS ++ +H + R+ +K ++ NEG
Sbjct: 426 ARDAVQVPDKSRSATSHEQHIQETRQTIKREIHNEG 461
>AY058401-1|AAL13630.1| 922|Drosophila melanogaster GH16858p
protein.
Length = 922
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 422 SEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEG 529
+ D + V DKS ++ +H + R+ +K ++ NEG
Sbjct: 85 ARDAVQVPDKSRSATSHEQHIQETRQTIKREIHNEG 120
>AE013599-1186|AAF58740.2| 1462|Drosophila melanogaster CG30015-PB,
isoform B protein.
Length = 1462
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 422 SEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEG 529
+ D + V DKS ++ +H + R+ +K ++ NEG
Sbjct: 625 ARDAVQVPDKSRSATSHEQHIQETRQTIKREIHNEG 660
>AE013599-1185|AAF58741.2| 1462|Drosophila melanogaster CG30015-PA,
isoform A protein.
Length = 1462
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 422 SEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEG 529
+ D + V DKS ++ +H + R+ +K ++ NEG
Sbjct: 625 ARDAVQVPDKSRSATSHEQHIQETRQTIKREIHNEG 660
>AY051888-1|AAK93312.1| 503|Drosophila melanogaster LD37690p
protein.
Length = 503
Score = 29.5 bits (63), Expect = 4.2
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -2
Query: 424 RFFMFKSPFFITACHSFTELYLSFHLSVRLTLKLIRNSFVVKLIDEE 284
RF ++ +T T+L LSF+L+VRL K+ F KL++EE
Sbjct: 327 RFEAYRIVGALTYTAQLTQL-LSFYLNVRLPHKIAYGDFCRKLLNEE 372
>AE014297-4320|AAF56856.1| 503|Drosophila melanogaster CG11877-PA
protein.
Length = 503
Score = 29.5 bits (63), Expect = 4.2
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -2
Query: 424 RFFMFKSPFFITACHSFTELYLSFHLSVRLTLKLIRNSFVVKLIDEE 284
RF ++ +T T+L LSF+L+VRL K+ F KL++EE
Sbjct: 327 RFEAYRIVGALTYTAQLTQL-LSFYLNVRLPHKIAYGDFCRKLLNEE 372
>BT024236-1|ABC86298.1| 959|Drosophila melanogaster LD10772p
protein.
Length = 959
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 156 CCLCNYFLFRLY*VFNSLVLIYSKIIDRKLITEHYTA 46
C LC Y FR Y + N L + DR +TE Y +
Sbjct: 551 CNLCEYRAFRRYDIVNHLGFTHKIEGDRDQLTEQYVS 587
>AY119108-1|AAM50968.1| 647|Drosophila melanogaster RE09079p
protein.
Length = 647
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 156 CCLCNYFLFRLY*VFNSLVLIYSKIIDRKLITEHYTA 46
C LC Y FR Y + N L + DR +TE Y +
Sbjct: 239 CNLCEYRAFRRYDIVNHLGFTHKIEGDRDQLTEQYVS 275
>AE014297-360|AAF51949.1| 959|Drosophila melanogaster CG10979-PA
protein.
Length = 959
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 156 CCLCNYFLFRLY*VFNSLVLIYSKIIDRKLITEHYTA 46
C LC Y FR Y + N L + DR +TE Y +
Sbjct: 551 CNLCEYRAFRRYDIVNHLGFTHKIEGDRDQLTEQYVS 587
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,148,071
Number of Sequences: 53049
Number of extensions: 374524
Number of successful extensions: 850
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -