Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_G08
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68882-13|CAA93102.1|  296|Caenorhabditis elegans Hypothetical p...    29   3.8  
U00040-5|AAA50666.1|  934|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defecti...    28   5.0  
U53154-10|AAC25849.1|  142|Caenorhabditis elegans Hypothetical p...    28   5.0  
U50066-1|AAA93437.2|  378|Caenorhabditis elegans Resistance to i...    28   5.0  
Z98866-15|CAB11554.2|  335|Caenorhabditis elegans Hypothetical p...    28   6.7  
Z68159-8|CAD01080.1|  310|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ...    27   8.8  
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ...    27   8.8  
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ...    27   8.8  
AF047663-6|AAC04447.1|  368|Caenorhabditis elegans Hypothetical ...    27   8.8  
AF022973-11|AAK84524.3|  560|Caenorhabditis elegans Hypothetical...    27   8.8  

>Z68882-13|CAA93102.1|  296|Caenorhabditis elegans Hypothetical
           protein C47E12.10 protein.
          Length = 296

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 389 CYKKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKS 511
           C  K++ E  ESED+    D     R       K RKK+K+
Sbjct: 39  CGSKKKKEKSESEDETEDEDSENQRRRKKRAADKKRKKIKA 79


>U00040-5|AAA50666.1|  934|Caenorhabditis elegans Hypothetical
           protein C18H2.4 protein.
          Length = 934

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = -2

Query: 400 FFITACHSFTELYLSFHLSVRLTLKLIRN 314
           FF+T C +    +++F  ++RL+LKLIRN
Sbjct: 393 FFLT-CIAKVVTFMTFGFNIRLSLKLIRN 420


>U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defective
           protein 5 protein.
          Length = 1198

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 407 LEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENE 526
           L+HEE+E K T+TD  M        D   + +L + +E E
Sbjct: 822 LKHEENELKKTITDMGMRLNEAKKSDEFLKSELSTALEEE 861


>U53154-10|AAC25849.1|  142|Caenorhabditis elegans Hypothetical
           protein C33G8.3 protein.
          Length = 142

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 395 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSD 514
           KK+  + EE EDK     K  +S   S E++K RK  + +
Sbjct: 103 KKKNKDSEEEEDKKKDKKKKNDSSDESEEENKKRKNKRKN 142


>U50066-1|AAA93437.2|  378|Caenorhabditis elegans Resistance to
           inhibitors of cholinesteraseprotein 3 protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 410 EHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEG 529
           E EE E+++    KS +S    G+  KNR K  S+ E+EG
Sbjct: 297 EIEEEEEEVKPVKKSKSSSQSVGK-RKNRPKSTSEEEDEG 335


>Z98866-15|CAB11554.2|  335|Caenorhabditis elegans Hypothetical
           protein Y49E10.18 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 430 VLRFFMFKSPFFITACHSFTELYLSF 353
           +L FF  K PFF  A H FT  Y +F
Sbjct: 147 ILDFFTGKKPFFNDAGHIFTYFYDAF 172


>Z68159-8|CAD01080.1|  310|Caenorhabditis elegans Hypothetical
           protein C33D9.9 protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 413 HEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSD 514
           H E+  K +  D +M + +HS   +K R+ + S+
Sbjct: 207 HSENRGKASSKDNAMETNSHSSSGTKKRRVISSE 240


>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
           potassium channelsprotein 11, isoform c protein.
          Length = 1375

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 398 KRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLK 508
           ++R E +ES+D+ T  D     +T SG++ K RKK K
Sbjct: 724 EKRSEEKESKDQETNDDL----KTESGQEKKRRKKKK 756


>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
           potassium channelsprotein 11, isoform a protein.
          Length = 1544

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 398 KRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLK 508
           ++R E +ES+D+ T  D     +T SG++ K RKK K
Sbjct: 724 EKRSEEKESKDQETNDDL----KTESGQEKKRRKKKK 756


>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
           potassium channelsprotein 11, isoform b protein.
          Length = 1720

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 398 KRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLK 508
           ++R E +ES+D+ T  D     +T SG++ K RKK K
Sbjct: 724 EKRSEEKESKDQETNDDL----KTESGQEKKRRKKKK 756


>AF047663-6|AAC04447.1|  368|Caenorhabditis elegans Hypothetical
           protein W09G12.7 protein.
          Length = 368

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +2

Query: 395 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEG 529
           KK++   ++S D  + +  S +S   S +D K +KK K   +N+G
Sbjct: 128 KKKKKSKKDSSDDSSDSSDSSDSSDSSDDDKKKKKKSKKS-KNKG 171


>AF022973-11|AAK84524.3|  560|Caenorhabditis elegans Hypothetical
           protein F25G6.1 protein.
          Length = 560

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 383 ASCYKKRRLEHEESEDKITVTDKSMNSRTHSGEDSKN 493
           + C  K R++H    +K+TV   ++NSR     D++N
Sbjct: 60  SKCDPKNRIKHTARYEKVTVFGVTVNSRQCIDFDNRN 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,163,414
Number of Sequences: 27780
Number of extensions: 220219
Number of successful extensions: 688
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)