Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_F24
(637 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 31 0.006
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 29 0.025
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 24 1.2
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 2.8
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 23 2.8
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 23 2.8
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 21 6.5
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 21 6.5
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 21 8.6
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 21 8.6
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 31.5 bits (68), Expect = 0.006
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = -3
Query: 542 VHNLTVRGAPSLLH*STRVYQVGQNHPSRTTLLFPPAGCPLTKSTALLTSNSDFENPVKR 363
+HNL+ P + + + QV +N P T PPA P T S++ L S NP R
Sbjct: 181 MHNLSSVPQPQPVLPTYKWMQVKRNVPKPTVPKIPPAEFPTTSSSSALES----PNPASR 236
Query: 362 SS 357
SS
Sbjct: 237 SS 238
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 29.5 bits (63), Expect = 0.025
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = -3
Query: 542 VHNLTVRGAPSLLH*STRVYQVGQNHPSRTTLLFPPAGCPLTKSTALLTSNSDFENPVKR 363
+HNL+ P + + + QV +N P T PPA P T S++ L S +P R
Sbjct: 181 MHNLSSVPQPQPVLPTYKWMQVKRNVPKPTVPKIPPAEFPTTSSSSALES----PDPASR 236
Query: 362 SS 357
SS
Sbjct: 237 SS 238
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 132 DRFKVKQITQIDSNFLQLFVNCLYLFVY 215
DR + TQ + + LFV C++L Y
Sbjct: 763 DRLMIDYKTQKTGSKIHLFVKCVFLMGY 790
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 62 LEQFLKLVRTGELIH 106
L +F K+ ++GELIH
Sbjct: 1032 LVKFYKVSKSGELIH 1046
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 416 WLKDNLLVEREELFLKDDSVR 478
WLKD ++ E L+ +SVR
Sbjct: 361 WLKDGHPIDHNEAVLRIESVR 381
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +2
Query: 377 SQNLNWTLKELLIWLKDNLLVEREE 451
+QNLN T +++ IW ++ + ++E
Sbjct: 119 AQNLNLTERQIKIWFQNRRMKFKKE 143
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +2
Query: 377 SQNLNWTLKELLIWLKDNLLVEREE 451
+QNLN T +++ IW ++ + ++E
Sbjct: 139 AQNLNLTERQIKIWFQNRRMKFKKE 163
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/34 (23%), Positives = 20/34 (58%)
Frame = +2
Query: 377 SQNLNWTLKELLIWLKDNLLVEREELFLKDDSVR 478
++NLN + +++ IW ++ + ++E K + R
Sbjct: 122 AENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPR 155
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/34 (23%), Positives = 20/34 (58%)
Frame = +2
Query: 377 SQNLNWTLKELLIWLKDNLLVEREELFLKDDSVR 478
++NLN + +++ IW ++ + ++E K + R
Sbjct: 113 AENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPR 146
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 458 RTTLLFPPAGCPLTKSTALLTSNSDFENP 372
R + L CP+T S + +S+ E+P
Sbjct: 367 RYSALINSQSCPITSSGSTDSSSQSVEDP 395
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 62 LEQFLKLVRTGELIH 106
L +F K+ ++GELIH
Sbjct: 313 LVKFYKVSKSGELIH 327
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,894
Number of Sequences: 336
Number of extensions: 2721
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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