Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_F24
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75553-5|CAA99950.2|  533|Caenorhabditis elegans Hypothetical pr...    29   2.1  
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AL110479-3|CAB60312.2|  330|Caenorhabditis elegans Hypothetical ...    29   2.8  
AF039720-12|AAB96704.1|  399|Caenorhabditis elegans Hypothetical...    29   3.7  
AC024844-2|AAK29954.2|  399|Caenorhabditis elegans Hypothetical ...    29   3.7  

>Z75553-5|CAA99950.2|  533|Caenorhabditis elegans Hypothetical
           protein ZC443.5 protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 25/70 (35%), Positives = 32/70 (45%)
 Frame = +2

Query: 326 VKRKEITLPSLKTFLPDSQNLNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 505
           +KR    L   KT L DS+ L    K +L   K +   +R    L+D  V P  LVL + 
Sbjct: 407 LKRHGGCLQYHKTMLGDSEQLLKAFKTVLTERKYSENAQRLARILRDQPVSPKDLVLKHC 466

Query: 506 EDWELHGQLN 535
           E    HG LN
Sbjct: 467 EFAVEHGALN 476


>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical protein
            C06E1.10 protein.
          Length = 1148

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +2

Query: 308  ELLFNKVKRKEITL-PSLKTFLPDSQNLNWTLKELLIWLKDNL 433
            E+L NK+  KE+T   SLK      +N NW L+E L W+ +++
Sbjct: 1082 EMLLNKLIEKEVTTRSSLKEQW--LKNENWLLEEYLEWVPESV 1122


>AL110479-3|CAB60312.2|  330|Caenorhabditis elegans Hypothetical
           protein Y105C5B.4 protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 126 FLDRFKVKQITQIDSNFLQLFVNCLYLFV-YFYI 224
           F+D+       +I  +FL  F+NCLYL + YFY+
Sbjct: 179 FIDKQMTSTFFKIGGSFL--FLNCLYLIIAYFYL 210


>AF039720-12|AAB96704.1|  399|Caenorhabditis elegans Hypothetical
           protein F33D11.10 protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = +2

Query: 326 VKRKEITLPSLKTFLPDSQNLNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 505
           VKR E+TL  +K F        W   + LI L D L + +  LF         +   + E
Sbjct: 229 VKRDELTLEGIKQFFVAVDREEWKF-DTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKE 287

Query: 506 EDW---ELHGQLNYELKENDKIM 565
            ++    +HG +  E K+ D++M
Sbjct: 288 ANFTVSSMHGDM--EQKDRDEVM 308


>AC024844-2|AAK29954.2|  399|Caenorhabditis elegans Hypothetical
           protein Y65B4A.6 protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = +2

Query: 326 VKRKEITLPSLKTFLPDSQNLNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 505
           VKR E+TL  +K F        W   + LI L D L + +  LF         +   + E
Sbjct: 229 VKRDELTLEGIKQFFVAVDREEWKF-DTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKE 287

Query: 506 EDW---ELHGQLNYELKENDKIM 565
            ++    +HG +  E K+ D++M
Sbjct: 288 ANFTVSSMHGDM--EQKDRDEVM 308


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,191,796
Number of Sequences: 27780
Number of extensions: 256931
Number of successful extensions: 545
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)