Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_F20
         (543 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   104   5e-23
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...    56   1e-08
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    31   0.41 
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p...    28   3.8  
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p...    27   6.6  
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical...    27   6.6  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  104 bits (249), Expect = 5e-23
 Identities = 62/151 (41%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
 Frame = +1

Query: 94  PRVLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIASYTPAER 270
           P  L   N  LAE+++ +G+  S  D Q+F  +G AP A+  P+V RWY  +ASYT AER
Sbjct: 8   PAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAER 67

Query: 271 KTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXXXKAYAD 444
           KTW+   G++P                      DLFGS                  AYA+
Sbjct: 68  KTWASAGGSAP------------AAAAADGDDFDLFGSDDEEEDAEKAKIVEERLAAYAE 115

Query: 445 KKSKKPXLIAKSSILLDVXPWDDETDMKEME 537
           KK+KK   IAKSS++LDV PWDDETD+ EME
Sbjct: 116 KKAKKAGPIAKSSVILDVKPWDDETDLGEME 146


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 29/58 (50%), Positives = 33/58 (56%)
 Frame = +1

Query: 364 DLFGSGXXXXXXXXXXXXXXXXKAYADKKSKKPXLIAKSSILLDVXPWDDETDMKEME 537
           DLFGS                  AYA KK+ K   IAKSS++LDV PWDDETD+ EME
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEME 196


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 31.5 bits (68), Expect = 0.41
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -3

Query: 265 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 128
           QP CM   + + VV+     PAP Q     + Q +++C+QT+   Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171


>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical protein
            M01F1.7 protein.
          Length = 1034

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +1

Query: 109  DLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAERKT 276
            D+ +Y  E+ Y+  Y  ++ D+Q           N PH L ++N   S  P ++K+
Sbjct: 875  DVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEPLKQKS 930


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -3

Query: 265 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 128
           QP CM   + + VV+     PA  Q     + Q +++C+QT+   Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171


>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
            protein M01F1.7 protein.
          Length = 1034

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +1

Query: 109  DLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAERKT 276
            D+ +Y  E+ Y+  Y  ++ D+Q           N PH L ++N   S  P ++K+
Sbjct: 875  DVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEPLKQKS 930


>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 220  HVLRWYNQIASYTPAERKTWSQGTSP 297
            H+L   +Q+ S TPA    W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549


>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 220  HVLRWYNQIASYTPAERKTWSQGTSP 297
            H+L   +Q+ S TPA    W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.313    0.128    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,258,162
Number of Sequences: 27780
Number of extensions: 177268
Number of successful extensions: 366
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)