Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_F14
(378 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 202 2e-51
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 202 2e-51
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 190 6e-48
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 183 1e-45
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 160 7e-39
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 152 2e-36
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 150 1e-35
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 149 2e-35
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 126 1e-28
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 115 3e-25
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 103 1e-21
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 101 4e-21
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 77 8e-14
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 76 3e-13
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 69 3e-11
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 69 3e-11
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 63 2e-09
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 61 8e-09
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 60 1e-08
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 2e-07
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 53 2e-06
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 52 4e-06
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 44 0.001
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 42 0.004
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 38 0.082
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 36 0.19
UniRef50_UPI00006CDDBC Cluster: hypothetical protein TTHERM_0029... 35 0.44
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 0.58
UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR, substrat... 32 4.1
UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_A5K9F1 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_Q18VR2 Cluster: Phage integrase; n=2; Clostridiales|Rep... 31 5.4
UniRef50_Q5UQF3 Cluster: Uncharacterized protein R481; n=1; Acan... 31 7.1
UniRef50_A5V188 Cluster: Heat shock protein Hsp90; n=5; Chlorofl... 31 9.4
UniRef50_A1FW23 Cluster: Signal transduction histidine kinase; n... 31 9.4
UniRef50_A0YEG9 Cluster: Sensor protein; n=1; marine gamma prote... 31 9.4
UniRef50_Q6IJD8 Cluster: HDC15098; n=1; Drosophila melanogaster|... 31 9.4
UniRef50_Q5TSX2 Cluster: ENSANGP00000027931; n=1; Anopheles gamb... 31 9.4
UniRef50_Q389R0 Cluster: Putative uncharacterized protein; n=3; ... 31 9.4
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 202 bits (493), Expect = 2e-51
Identities = 90/105 (85%), Positives = 99/105 (94%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 243
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 244 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGLLL 378
T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAA Y TGLL+
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLV 105
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 202 bits (492), Expect = 2e-51
Identities = 89/105 (84%), Positives = 100/105 (95%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 243
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 244 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGLLL 378
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA Y TGLLL
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLL 105
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 190 bits (464), Expect = 6e-48
Identities = 86/105 (81%), Positives = 96/105 (91%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 243
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 244 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGLLL 378
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA Y+TGLLL
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLL 105
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 183 bits (445), Expect = 1e-45
Identities = 81/89 (91%), Positives = 87/89 (97%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 243
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 244 TCQVAYSRIEGDHIVCAAYSHELPRYGVK 330
TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 160 bits (389), Expect = 7e-39
Identities = 68/105 (64%), Positives = 91/105 (86%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 243
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 244 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGLLL 378
Q+ ++I GD +V AAY+HELP +G++ GLTNYAA Y+TGLLL
Sbjct: 84 IAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLL 128
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 152 bits (369), Expect = 2e-36
Identities = 68/105 (64%), Positives = 84/105 (80%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 243
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 244 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGLLL 378
CQV Y+ ++GD +V AA S EL R+G+ GLTNYAA Y+TGLLL
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATGLLL 105
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 150 bits (363), Expect = 1e-35
Identities = 70/104 (67%), Positives = 81/104 (77%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 243
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 244 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGLL 375
CQ+A S IEGD I+ A S EL RYG+ VGL NYAA Y+TGLL
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLL 104
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 149 bits (361), Expect = 2e-35
Identities = 67/101 (66%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Frame = +1
Query: 79 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 252
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 253 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGLL 375
V Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y+TGLL
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLL 113
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 126 bits (305), Expect = 1e-28
Identities = 55/101 (54%), Positives = 72/101 (71%)
Frame = +1
Query: 76 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 255
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 256 AYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGLLL 378
+ + GD VC A S ELP+YG+K+GL+NY A Y+TGLL+
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATGLLV 104
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 115 bits (277), Expect = 3e-25
Identities = 48/88 (54%), Positives = 68/88 (77%)
Frame = +1
Query: 115 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 294
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 295 AYSHELPRYGVKVGLTNYAAXYSTGLLL 378
A S+EL R+GV GL +YAA Y+TGLLL
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATGLLL 394
Score = 45.2 bits (102), Expect = 4e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 156
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 103 bits (247), Expect = 1e-21
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 243
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 244 TCQVAYSRIEGD 279
T Q+ + I GD
Sbjct: 72 TAQIISASIAGD 83
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 101 bits (242), Expect = 4e-21
Identities = 44/96 (45%), Positives = 64/96 (66%)
Frame = +1
Query: 91 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 270
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 271 EGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGLLL 378
+GD ++ A S EL RYG+ G TNY+A Y+TG L+
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYATGFLI 99
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 77.4 bits (182), Expect = 8e-14
Identities = 35/55 (63%), Positives = 43/55 (78%)
Frame = +1
Query: 214 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGLLL 378
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAA Y GLLL
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIGLLL 55
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 75.8 bits (178), Expect = 3e-13
Identities = 35/94 (37%), Positives = 55/94 (58%)
Frame = +1
Query: 88 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 267
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 268 IEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTG 369
++GD I+ ++Y L + K NY Y G
Sbjct: 69 VDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLG 102
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 68.9 bits (161), Expect = 3e-11
Identities = 38/90 (42%), Positives = 51/90 (56%)
Frame = +1
Query: 106 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 285
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 286 VCAAYSHELPRYGVKVGLTNYAAXYSTGLL 375
+ AAYS EL YG + + A Y TG+L
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAYLTGML 88
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 68.9 bits (161), Expect = 3e-11
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +1
Query: 106 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 285
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 286 VCAAYSHEL-PRYGVKVGLTNYAAXYSTGLL 375
+ AA+S EL ++G K N A Y TG L
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAYLTGYL 89
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 62.9 bits (146), Expect = 2e-09
Identities = 31/51 (60%), Positives = 36/51 (70%)
Frame = +1
Query: 226 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGLLL 378
++NK V CQV S + GD + +A S EL YGVKVGLTNYAA Y TGLLL
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLL 54
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 60.9 bits (141), Expect = 8e-09
Identities = 35/90 (38%), Positives = 52/90 (57%)
Frame = +1
Query: 106 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 285
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 286 VCAAYSHELPRYGVKVGLTNYAAXYSTGLL 375
+A S EL +YG N A Y TGLL
Sbjct: 59 YSSAVSSELAKYGYTGATGNTTAAYLTGLL 88
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 60.5 bits (140), Expect = 1e-08
Identities = 35/90 (38%), Positives = 49/90 (54%)
Frame = +1
Query: 106 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 285
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 286 VCAAYSHELPRYGVKVGLTNYAAXYSTGLL 375
+ +A+S +L YG + N + Y TGLL
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAYLTGLL 88
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 2e-07
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +1
Query: 112 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 207
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 53.2 bits (122), Expect = 2e-06
Identities = 33/89 (37%), Positives = 47/89 (52%)
Frame = +1
Query: 109 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 288
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 289 CAAYSHELPRYGVKVGLTNYAAXYSTGLL 375
+A S L +G N +A Y TG L
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAYLTGYL 88
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 52.0 bits (119), Expect = 4e-06
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 237
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 238 DVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGLLL 378
+++ + +S + GD IV A S +L ++G+ N Y GLLL
Sbjct: 59 NLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIGLLL 105
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 44.0 bits (99), Expect = 0.001
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = +1
Query: 103 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 282
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 283 IVCAAYSHEL-PRYG--VKVGLTNYAAXYSTGLLL 378
++ + L R+G + + A Y TG L
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTGFAL 92
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 41.9 bits (94), Expect = 0.004
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 121 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 297
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 298 YSHELPRYGVKVGLTNYAAXYSTGLL 375
L +YGV + N Y G +
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVGYI 83
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 37.5 bits (83), Expect = 0.082
Identities = 25/84 (29%), Positives = 39/84 (46%)
Frame = +1
Query: 124 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 303
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 304 HELPRYGVKVGLTNYAAXYSTGLL 375
L + + + N Y G +
Sbjct: 61 KTLKK-ALNIDGNNIQMYYLAGYM 83
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 36.3 bits (80), Expect = 0.19
Identities = 23/84 (27%), Positives = 43/84 (51%)
Frame = +1
Query: 124 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 303
+R RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S
Sbjct: 8 RRLREEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHS 60
Query: 304 HELPRYGVKVGLTNYAAXYSTGLL 375
L G K + A Y TG L
Sbjct: 61 RYLASKGWKGSRKSIPASYLTGYL 84
>UniRef50_UPI00006CDDBC Cluster: hypothetical protein TTHERM_00295350;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00295350 - Tetrahymena thermophila SB210
Length = 1346
Score = 35.1 bits (77), Expect = 0.44
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = -1
Query: 228 ETHNQTIFRCVIFVLVLNNEAFTSIIISFPFTTPLE---FYLVPLEVLFVLH---NFNES 67
+T+ I++ VI ++ N+E I PF+ PLE FY P+ V L ++N
Sbjct: 1118 QTNMTQIYKEVIKTIIANSEFDKKSITFEPFSFPLEYVYFYPTPIGVAIKLKLSASWNAG 1177
Query: 66 HILNLSYKVASTDRTTKLKRK 4
LNLS+K A+ D + + K
Sbjct: 1178 FNLNLSFKNATLDLSAGVNTK 1198
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 0.58
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 243
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 244 TCQVA 258
C +A
Sbjct: 161 QCSLA 165
>UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR,
substrate-binding; n=1; Dechloromonas aromatica RCB|Rep:
Regulatory protein, LysR:LysR, substrate-binding -
Dechloromonas aromatica (strain RCB)
Length = 327
Score = 31.9 bits (69), Expect = 4.1
Identities = 18/80 (22%), Positives = 40/80 (50%)
Frame = +1
Query: 112 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVC 291
++K + R+G YY+ + V+ + +Y+ P RL+ +++ + A E H+
Sbjct: 4 RIKSRASRQGNW-YYSNQAFVLDETMRYDLPDLRLVAAIADSGSLTRAA----EQVHLAP 58
Query: 292 AAYSHELPRYGVKVGLTNYA 351
++ SH L + +G+ +A
Sbjct: 59 SSASHRLTQLEAALGIPLFA 78
>UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1936
Score = 31.9 bits (69), Expect = 4.1
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 76 KVVKNKQYFKRYQVKFKRRREG-KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 243
+++K + F+ ++ +KR+RE K+ Y + V+++ NKYN + I L++KD+
Sbjct: 1107 ELLKKNRSFENHEQIYKRQREKLKSHYKSSMSKVIENSNKYNN-LIKDIEALNSKDI 1162
>UniRef50_A5K9F1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 970
Score = 31.9 bits (69), Expect = 4.1
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -1
Query: 216 QTIFRCVIFVLVLNNEAFTSIIISFPFTTPLEFYLVPLEVLFVLHN 79
+T ++CVI V++ + E+ +I+ +PF P + P + F ++N
Sbjct: 869 ETDWKCVIAVIIKSKESLKNILNEYPFEIPTALF-QPFKSFFFMYN 913
>UniRef50_Q18VR2 Cluster: Phage integrase; n=2; Clostridiales|Rep:
Phage integrase - Desulfitobacterium hafniense (strain
DCB-2)
Length = 317
Score = 31.5 bits (68), Expect = 5.4
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 148 DYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG--DHIVCAAYSHELPRY 321
D + +++ + K +Y I + NK +T + Y + E D + C + LPR
Sbjct: 171 DIDLKMSMLIVPRTKNGKQRYIPISKSLNKILTDYLDYRKAESEEDFLFCNEFGQYLPRT 230
Query: 322 GVKVGLTNY 348
+++G+T Y
Sbjct: 231 TLQIGITKY 239
>UniRef50_Q5UQF3 Cluster: Uncharacterized protein R481; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein R481 - Mimivirus
Length = 902
Score = 31.1 bits (67), Expect = 7.1
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = -1
Query: 225 THNQTIFRCVIFVLVLNNEAFTSIIISFPFTTPLEFYLVPLEVLFVLHNFNESHILNLSY 46
++NQ I F ++N + T+I+I+ T + Y+ + VL+NFN +ILNL
Sbjct: 536 SYNQNILCSDEFKTIVNLDVDTNILINI--MTNEKKYIHSINTNIVLNNFNYDNILNLVT 593
Query: 45 K 43
K
Sbjct: 594 K 594
>UniRef50_A5V188 Cluster: Heat shock protein Hsp90; n=5; Chloroflexi
(class)|Rep: Heat shock protein Hsp90 - Roseiflexus sp.
RS-1
Length = 627
Score = 30.7 bits (66), Expect = 9.4
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 103 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVR-LSNKDVTCQVAYSRIEGD 279
KR + +RR EGK Y+RK L+ +D P +R + + ++D+ V+ ++ D
Sbjct: 276 KRERGLIERRMEGKIRLYSRKVLIQEDAKDVLPPYFRFVEGVVDSEDLPLNVSREGVQRD 335
>UniRef50_A1FW23 Cluster: Signal transduction histidine kinase; n=1;
Stenotrophomonas maltophilia R551-3|Rep: Signal
transduction histidine kinase - Stenotrophomonas
maltophilia R551-3
Length = 528
Score = 30.7 bits (66), Expect = 9.4
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 373 ADQLNMXQHNLSDQPSHHNVATHVNKQRTQYGHLQSESRPPGM-LHLCWRDAQSDD 209
A+ L++ H L+ H TH + HLQ + P + LH C R A+ +D
Sbjct: 412 AEVLSLAIHELATNALRHGALTHEDGHIDVSWHLQVQEGQPWLGLHWCERHAEVED 467
>UniRef50_A0YEG9 Cluster: Sensor protein; n=1; marine gamma
proteobacterium HTCC2143|Rep: Sensor protein - marine
gamma proteobacterium HTCC2143
Length = 521
Score = 30.7 bits (66), Expect = 9.4
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -1
Query: 153 IISFPFTTPLEFYLVPLEVLFVLHNFNESHILNLSYKVASTDRTTK 16
+I F+ ++ +LV L +LF+ H SH+++++ V D T+
Sbjct: 157 LIVILFSQGIQTFLVSLFILFIFHRLVTSHLMHIARHVGKFDLDTQ 202
>UniRef50_Q6IJD8 Cluster: HDC15098; n=1; Drosophila
melanogaster|Rep: HDC15098 - Drosophila melanogaster
(Fruit fly)
Length = 77
Score = 30.7 bits (66), Expect = 9.4
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 103 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV---TCQVAYSRIE 273
+R QV +RRR +T R R K K N+PK L +RL+ ++ Q+ SR+
Sbjct: 7 RRRQVMKRRRRHHQTLLLTRPR-AFDGKLKANSPKVALYLRLAQMELIKWQQQIIASRLS 65
Query: 274 GDHI 285
G ++
Sbjct: 66 GSYL 69
>UniRef50_Q5TSX2 Cluster: ENSANGP00000027931; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000027931 - Anopheles gambiae
str. PEST
Length = 114
Score = 30.7 bits (66), Expect = 9.4
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -1
Query: 144 FPFTTPL--EFYLVPLEVLFVLHNFNESHILNLSYKVASTDRTTKLKRK 4
FP+TT L + L P EV + +NF+ ++ +++ + RTT+L+RK
Sbjct: 64 FPYTTNLGHKLMLHPREVESIPNNFSVLNVRSIASDNSDKTRTTRLERK 112
>UniRef50_Q389R0 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 993
Score = 30.7 bits (66), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 241 HLCWRDAQSDDI*VCYICSCPEQRGV-YEHNNQ 146
H W + D I C+ CS P RG+ EH+N+
Sbjct: 585 HCSWVSSSGDYIDTCFACSHPHPRGLSVEHDNR 617
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,596,748
Number of Sequences: 1657284
Number of extensions: 7851148
Number of successful extensions: 19907
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 19457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19882
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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