Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_F14
(378 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 190 3e-49
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 30 0.63
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 30 0.63
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 1.9
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z69386-3|CAA93432.2| 322|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical pr... 27 4.5
AF022969-1|AAB69894.3| 391|Caenorhabditis elegans Hypothetical ... 27 4.5
U40945-4|AAA81722.2| 318|Caenorhabditis elegans Hypothetical pr... 27 5.9
AL023835-12|CAA19484.1| 412|Caenorhabditis elegans Hypothetical... 26 7.8
AC087081-12|AAK66039.2| 324|Caenorhabditis elegans Hypothetical... 26 7.8
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 190 bits (463), Expect = 3e-49
Identities = 86/105 (81%), Positives = 96/105 (91%)
Frame = +1
Query: 64 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 243
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 244 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGLLL 378
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA Y+TGLLL
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLL 105
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 0.63
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 298 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 185
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 0.63
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 298 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 185
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 193 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 312
YN P+YR +++L K C+ + GD++ +CA + EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 1.9
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 5 FLFSLVVLSVDATL*LRFKIWDSLKL*RTNN---TSRGTK*NSRGVVKGKLIIMLVNASL 175
F+ L+ +S L +++ D + R +N T G NS+GVVK KL L S+
Sbjct: 53 FVLLLLAISAIQIDGLHYQLLDGIATFRLDNDDTTIGGVPRNSQGVVKIKLSCGLNRLSV 112
Query: 176 FRTRTNITHLNIV*LCV 226
T ++ L ++ C+
Sbjct: 113 ENKVTEVSSLELIHNCI 129
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 1.9
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 5 FLFSLVVLSVDATL*LRFKIWDSLKL*RTNN---TSRGTK*NSRGVVKGKLIIMLVNASL 175
F+ L+ +S L +++ D + R +N T G NS+GVVK KL L S+
Sbjct: 53 FVLLLLAISAIQIDGLHYQLLDGIATFRLDNDDTTIGGVPRNSQGVVKIKLSCGLNRLSV 112
Query: 176 FRTRTNITHLNIV*LCV 226
T ++ L ++ C+
Sbjct: 113 ENKVTEVSSLELIHNCI 129
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 340 SDQPSHHNVATHVNKQRTQYGHLQSESRP 254
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 340 SDQPSHHNVATHVNKQRTQYGHLQSESRP 254
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 340 SDQPSHHNVATHVNKQRTQYGHLQSESRP 254
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical
protein T20D3.8 protein.
Length = 282
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 235 KDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGL 372
+ +T ++ I I+ A +S YGVK + +Y STGL
Sbjct: 127 RTLTTSISTDTIYSTSIITAIFSCFFHDYGVKAPVVSYPTSVSTGL 172
>Z69386-3|CAA93432.2| 322|Caenorhabditis elegans Hypothetical
protein ZK596.3 protein.
Length = 322
Score = 27.1 bits (57), Expect = 4.5
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = -1
Query: 240 IFVGETHNQTIFRCVI--FVLVLNNEAFTSIIISFPFTTPLEFYLVPLEVLFVLHNFNES 67
+ + TH +F+C++ FV + N+ II FP T + + L V+ L +S
Sbjct: 141 VLLSMTH--ALFQCMLINFVSMANHSPTLERIIGFPLVTVETVHNLCLYVISALQYEQDS 198
Query: 66 HIL 58
H++
Sbjct: 199 HLM 201
>Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical
protein T13H5.2 protein.
Length = 408
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/69 (20%), Positives = 31/69 (44%)
Frame = -3
Query: 340 SDQPSHHNVATHVNKQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYICSCPEQRGVY 161
+D P+ +V+ + T + + E PG W +++DI + + + V
Sbjct: 291 NDLPAEKLTKLNVSARSTTFVPITLEGNVPGRKLYWWWRLENNDINFSILRAAEGEEKVA 350
Query: 160 EHNNQFSLH 134
EH++ + +H
Sbjct: 351 EHDDDYMVH 359
>AF022969-1|AAB69894.3| 391|Caenorhabditis elegans Hypothetical
protein C29G2.5 protein.
Length = 391
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 184 KNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 276
K+K TP YRL++ L + D+T V S I G
Sbjct: 187 KSKSRTPTYRLMLILGSLDLTGLVISSLIPG 217
>U40945-4|AAA81722.2| 318|Caenorhabditis elegans Hypothetical
protein F10D7.4 protein.
Length = 318
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -1
Query: 120 FYLVPLEVLFVLHNFNESHILNLSYKVASTDR 25
FY VP + L +L++ N+ ++ L+Y +R
Sbjct: 128 FYHVPRDYLHLLYHGNDQQVVQLNYSKTGLER 159
>AL023835-12|CAA19484.1| 412|Caenorhabditis elegans Hypothetical
protein Y37A1B.13 protein.
Length = 412
Score = 26.2 bits (55), Expect = 7.8
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 255 HLACYIFVGETHNQTIFRCVIFVLVLNNEAFTSIIISFPFTTPLEFY 115
HL+ +F E Q F+ +IFV++LN +S P FY
Sbjct: 65 HLSNILFYSERKMQ-FFKYIIFVIILNQLVVDVHSLSMPMFLKCLFY 110
>AC087081-12|AAK66039.2| 324|Caenorhabditis elegans Hypothetical
protein Y82E9BL.17 protein.
Length = 324
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -1
Query: 108 PLEVLFVLHNFNESHILNLSYKVASTDRTTKLKRK 4
P E LF F E HILN S + A R LKRK
Sbjct: 229 PFEHLFHFQTF-EIHILNFSIENAIQFRDDLLKRK 262
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,276,741
Number of Sequences: 27780
Number of extensions: 193654
Number of successful extensions: 473
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -