Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_F07
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin ...   136   2e-32
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...   135   3e-32
AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical...    48   4e-06
Z81070-10|CAB03004.1|  163|Caenorhabditis elegans Hypothetical p...    31   0.71 
Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z83119-3|CAB05581.1|  163|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z82062-2|CAB04890.1|  489|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin
           protein 2 protein.
          Length = 195

 Score =  136 bits (328), Expect = 2e-32
 Identities = 62/84 (73%), Positives = 69/84 (82%)
 Frame = +3

Query: 93  PLPXFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGC 272
           P P FK  AVV+GEF D+SLSDYKGKYVVLFFYPLDFTFVCPTEIIAFS++A+EF+ I  
Sbjct: 9   PAPQFKTQAVVDGEFVDVSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAEEFKAINT 68

Query: 273 EVLGAPXDSHFTHLAWINTPRKPG 344
            VL A  DS F+HLAWIN PRK G
Sbjct: 69  VVLAASTDSVFSHLAWINQPRKHG 92



 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 43/60 (71%), Positives = 50/60 (83%)
 Frame = +1

Query: 343 GGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIYDKQXLRQITINDLPVGXSVE 522
           GGLG MNIP+++D +H+ISRDYGVL E+ GI FRGLFII   Q LRQITINDLPVG SV+
Sbjct: 92  GGLGEMNIPVLADTNHQISRDYGVLKEDEGIAFRGLFIIDPSQNLRQITINDLPVGRSVD 151



 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 30/48 (62%), Positives = 33/48 (68%)
 Frame = +2

Query: 503 PWGXXWKENLRLVQAFQFTDKHGXVCPANWXXGAKTIKPDTKAAQEYF 646
           P G    E LRLVQAFQF +KHG VCPA W  G+ TIKP  K +QEYF
Sbjct: 145 PVGRSVDETLRLVQAFQFVEKHGEVCPAGWTPGSDTIKPGVKESQEYF 192


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score =  135 bits (326), Expect = 3e-32
 Identities = 57/85 (67%), Positives = 71/85 (83%)
 Frame = +3

Query: 90  NPLPXFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIG 269
           N +P FK TAVV+G+FK IS  DYKGK++V+FFYPLDFTFVCPTEIIA+ ++A+EFR +G
Sbjct: 37  NTVPAFKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEIIAYGDRANEFRSLG 96

Query: 270 CEVLGAPXDSHFTHLAWINTPRKPG 344
            EV+    DSHF+HLAW+NTPRK G
Sbjct: 97  AEVVACSCDSHFSHLAWVNTPRKDG 121



 Score = 70.1 bits (164), Expect = 1e-12
 Identities = 31/60 (51%), Positives = 45/60 (75%)
 Frame = +1

Query: 343 GGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIYDKQXLRQITINDLPVGXSVE 522
           GGLG M+IPL++D + +I+  +GVLD+E+G+ +RGLF+I     +R  T NDLPVG SV+
Sbjct: 121 GGLGDMDIPLLADFNKKIADSFGVLDKESGLSYRGLFLIDPSGTVRHTTCNDLPVGRSVD 180



 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 25/50 (50%), Positives = 34/50 (68%)
 Frame = +2

Query: 503 PWGXXWKENLRLVQAFQFTDKHGXVCPANWXXGAKTIKPDTKAAQEYFGE 652
           P G    E LR+++AFQF+DKHG VCPA+W   + TIKP    ++EYF +
Sbjct: 174 PVGRSVDETLRVLKAFQFSDKHGEVCPADWHEDSPTIKPGVATSKEYFNK 223


>AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.11 protein.
          Length = 231

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = +3

Query: 138 KDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGAPXDSHFTHL 314
           K+ +L +Y G+ +++LF +P DFT VC TE+    + A EFRK   ++L    DS  TH 
Sbjct: 18  KNQTLHNYIGEQWLMLFSHPADFTPVCTTELAELVKLAPEFRKRHVQILAISIDSSETHR 77

Query: 315 AW 320
            W
Sbjct: 78  DW 79


>Z81070-10|CAB03004.1|  163|Caenorhabditis elegans Hypothetical
           protein F26E4.12 protein.
          Length = 163

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 20/57 (35%), Positives = 26/57 (45%)
 Frame = +3

Query: 120 VVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGAP 290
           V N    D+SLSDYKGK V++         +         E  D ++K G EVL  P
Sbjct: 9   VKNANGDDVSLSDYKGK-VLIIVNVASQCGLTNKNYTQLKELLDVYKKDGLEVLAFP 64


>Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK849.2c protein.
          Length = 390

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 504 GQVVDGDLPEALLVVDDEESSEGDARLLVQHS 409
           GQV  GDL   L+ V  +E S+ D  + ++HS
Sbjct: 331 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 362


>Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical
           protein ZK849.2b protein.
          Length = 412

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 504 GQVVDGDLPEALLVVDDEESSEGDARLLVQHS 409
           GQV  GDL   L+ V  +E S+ D  + ++HS
Sbjct: 353 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 384


>Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical
           protein ZK849.2a protein.
          Length = 414

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 504 GQVVDGDLPEALLVVDDEESSEGDARLLVQHS 409
           GQV  GDL   L+ V  +E S+ D  + ++HS
Sbjct: 355 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 386


>Z83119-3|CAB05581.1|  163|Caenorhabditis elegans Hypothetical
           protein R05H10.5 protein.
          Length = 163

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +3

Query: 120 VVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGAP 290
           V N + +D  LS+Y+GK V++         +  +    F E  D ++K G EVL  P
Sbjct: 9   VKNAQGEDTPLSNYQGK-VLIIVNVASQCGLTNSNYNQFKELLDVYKKDGLEVLAFP 64


>Z82062-2|CAB04890.1|  489|Caenorhabditis elegans Hypothetical
           protein W02A11.3 protein.
          Length = 489

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = +3

Query: 333 RKPGRTRSHEHSSDKRQVAPHLSRLRSAGRGDGHPLPRTLHHLRQAXPQADHHQRP 500
           R+  R R  +H S + Q+   L ++     G  H       HL Q   Q   HQ+P
Sbjct: 190 RRARRQRQTQHESQRMQLEHRLQQITGPVPGSEHNCMTGCPHLHQ--QQQQQHQQP 243


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,285,966
Number of Sequences: 27780
Number of extensions: 243466
Number of successful extensions: 842
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)