Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_F03
(418 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 100 1e-20
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 87 2e-16
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 72 4e-12
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 65 5e-10
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 65 6e-10
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 64 8e-10
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 60 2e-08
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 59 3e-08
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 59 4e-08
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 57 2e-07
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 48 1e-04
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 44 0.002
UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35... 42 0.005
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 42 0.007
UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4; T... 38 0.11
UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, wh... 35 0.78
UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein ORF-c4... 34 1.4
UniRef50_UPI0000499951 Cluster: hypothetical protein 264.t00009;... 33 3.1
UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_Q4Y885 Cluster: Putative uncharacterized protein; n=7; ... 31 9.6
UniRef50_A6RMP4 Cluster: Putative uncharacterized protein; n=1; ... 31 9.6
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 100 bits (240), Expect = 1e-20
Identities = 49/75 (65%), Positives = 57/75 (76%)
Frame = +3
Query: 174 VVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEI 353
VVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +KT+K+
Sbjct: 49 VVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQ 108
Query: 354 RKKSLFPPRVYAVKA 398
RK+ L+P R YAVKA
Sbjct: 109 RKERLYPLRKYAVKA 123
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 86.6 bits (205), Expect = 2e-16
Identities = 42/73 (57%), Positives = 52/73 (71%)
Frame = +3
Query: 177 VRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIR 356
VRK+IARV V + + LR YKNKKY PLDLR + TRA+R+ LTKHEA +KT K+ +
Sbjct: 113 VRKSIARVLTVINANQRAQLRLFYKNKKYTPLDLRPRLTRALRRRLTKHEATLKTEKQRK 172
Query: 357 KKSLFPPRVYAVK 395
K+ FP R YAVK
Sbjct: 173 KEIHFPQRKYAVK 185
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 72.1 bits (169), Expect = 4e-12
Identities = 37/75 (49%), Positives = 48/75 (64%)
Frame = +3
Query: 174 VVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEI 353
VVRK IAR+ V +Q K LR Y + KYKP+DLR KKTRA+R+ LT HE +++ K+
Sbjct: 49 VVRKNIARLLTVINQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQ 108
Query: 354 RKKSLFPPRVYAVKA 398
K R +AVKA
Sbjct: 109 AKSRNQAVRKFAVKA 123
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 65.3 bits (152), Expect = 5e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +3
Query: 174 VVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEI 353
+VRKA+A+V VY+Q+ K R YK PL+LR K TRA RK LT + +KT KE
Sbjct: 68 LVRKAVAKVLTVYNQRKKEEARKKYKKLSKTPLNLRPKLTRAKRKGLTTKQLTMKTIKER 127
Query: 354 RKKSLFPPRVYAVKA 398
++ P R YA+ A
Sbjct: 128 KRAENLPKRKYALLA 142
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 64.9 bits (151), Expect = 6e-10
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +3
Query: 177 VRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIR 356
VRK +ARV VY+QK K+ LR YKNKK+KP +LR K T+ R L+ + T ++ +
Sbjct: 49 VRKNVARVLTVYNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQKK 108
Query: 357 KKSLFPPRVYAV 392
K FP R Y V
Sbjct: 109 KVQNFPQRKYLV 120
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 64.5 bits (150), Expect = 8e-10
Identities = 35/78 (44%), Positives = 46/78 (58%)
Frame = +3
Query: 165 RSXVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTR 344
R VVRK IAR+ + Q+ +LR + K+ PLDLR K TRA R+ALT +AK T
Sbjct: 49 RINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKLTRAKRRALTPQQAKKMTV 108
Query: 345 KEIRKKSLFPPRVYAVKA 398
K +K FP R +A+ A
Sbjct: 109 KASKKALNFPKRKFAIIA 126
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 60.1 bits (139), Expect = 2e-08
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = +3
Query: 225 KVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 398
K NL YK KKYK L LR KKTRA+R+ L+KHE + +K+ + + L P R AVKA
Sbjct: 43 KENLGKFYKGKKYKHLHLRPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 59.3 bits (137), Expect = 3e-08
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +3
Query: 177 VRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRK 347
+RK IARV V +QK + NLR YK K PLDLRAKKTRA+R+ L + +++++
Sbjct: 123 LRKDIARVLTVMNQKQRANLREFYKGKSQIPLDLRAKKTRAIRRKLNQQRFAMRSQR 179
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 58.8 bits (136), Expect = 4e-08
Identities = 29/77 (37%), Positives = 51/77 (66%)
Frame = +3
Query: 165 RSXVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTR 344
R +VRK IA+ V +++ + +++N K+ P+DLR KKTRA+R+ LT+ E KT+
Sbjct: 48 RIGLVRKRIAKFLTVINEQRRNSVKNAAKSSTKLPVDLRGKKTRAIRQRLTRSERAQKTQ 107
Query: 345 KEIRKKSLFPPRVYAVK 395
++ ++ + FP R +A+K
Sbjct: 108 RQWKRLNNFPLRKFALK 124
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 56.8 bits (131), Expect = 2e-07
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Frame = +3
Query: 177 VRKAIARVYIVYHQKMKVNLRNHYKNKKYK---PLDLRAKKTRAMRKALTKHEAKIKTRK 347
+RK+IAR+ V +Q + NL+ Y ++K + P LR K T R AL ++E KT +
Sbjct: 51 IRKSIARILTVLNQNERSNLKMFYADRKLRCKTPKVLRTKLTHRRRLALKENEKNRKTSR 110
Query: 348 EIRKKSLFPPRVYAVK 395
++R+ FP RVYAVK
Sbjct: 111 QMRQAHKFPKRVYAVK 126
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 47.6 bits (108), Expect = 1e-04
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +3
Query: 165 RSXVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTR 344
R V +K +ARV V +QK + R ++ ++ P R + T AMR LT+ + ++
Sbjct: 75 RFRVCKKDVARVLTVINQKARDEARAAFEGAEHIPKTFRPRLTHAMRCQLTEKQKRLLPS 134
Query: 345 KEIRKKSLFPPRVYAVK 395
K +++K FP YAVK
Sbjct: 135 KLMKRKLQFPKLKYAVK 151
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 264 KPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKK-SLFPPRV 383
KPLDLR KKTR +R+ L KHE ++T+K ++ L P++
Sbjct: 1 KPLDLRPKKTRVLRRRLNKHEESLRTKKTAEERPPLLDPQI 41
>UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35;
n=2; Encephalitozoon cuniculi|Rep: Similarity to 60S
ribosomal protein L35 - Encephalitozoon cuniculi
Length = 122
Score = 41.9 bits (94), Expect = 0.005
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 180 RKAIARVYIVYHQKMKVNLRNHYKNKKYK--PLDLRAKKTRAMRKALTKHEAKIKTRKEI 353
+K +AR V +K+ L Y+ P +LR K R+ R+ALTK + + KTR++
Sbjct: 48 KKNLARALTVRREKILEELVEAYRGTPVSKLPKELRPKLNRSKRRALTKTQLRRKTRRQR 107
Query: 354 RKKSLFPPRVYA 389
+ S FP ++A
Sbjct: 108 ARMSKFPRVIFA 119
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 41.5 bits (93), Expect = 0.007
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +3
Query: 219 KMKVNLRNHYKNKKYK--PLDLRAKKTRAMRKALTKHEAKI 335
K++ LR YK KK PLDLR KKT A+R+ LTKH+ +
Sbjct: 155 KVRTALREAYKKKKKSLLPLDLRPKKTCAIRRRLTKHQGML 195
>UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L29,
putative - Trichomonas vaginalis G3
Length = 124
Score = 37.5 bits (83), Expect = 0.11
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 180 RKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALT-KHEAKIKTRKEIR 356
R+ +ARV + + L+ Y K P+DLR + +++R L K+ K+ ++ R
Sbjct: 51 RRDVARVKSILMVSQRKALQEKYAKAKLVPIDLRKHQEKSLRNKLAPKYANKLTAQESRR 110
Query: 357 KKSLFPPRVYAVKA 398
K LF R +A+KA
Sbjct: 111 HKCLF-ERKFALKA 123
>UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 485
Score = 34.7 bits (76), Expect = 0.78
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 195 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKE 350
R Y++ +Q + + L N YKN+K +R+ K +K K KIK RK+
Sbjct: 280 RNYLIQNQIIILQLSNSYKNRKLSKKKIRSLKKSKKKKFKLKSILKIKKRKK 331
>UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein
ORF-c40_015; n=1; Sulfolobus solfataricus|Rep: Putative
uncharacterized protein ORF-c40_015 - Sulfolobus
solfataricus
Length = 360
Score = 33.9 bits (74), Expect = 1.4
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 204 IVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKA--LTKHEAKIKTRKEIRKKS 365
IV+ QK+K +L +Y+NK + K+R+ RKA + K+E K K I+ S
Sbjct: 205 IVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKANRIAKYERYFKEAKNIKTLS 260
>UniRef50_UPI0000499951 Cluster: hypothetical protein 264.t00009;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 264.t00009 - Entamoeba histolytica HM-1:IMSS
Length = 490
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 180 RKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 359
RKA + ++ + K N+ +K K+Y+ + K+ + K L K +KI RK K
Sbjct: 146 RKAQLKRRMLKKRMSKRNIMKFFKRKQYQSKKISKKQVKKAAKILLKKYSKILARKNNHK 205
Query: 360 KS 365
K+
Sbjct: 206 KT 207
>UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 31.5 bits (68), Expect = 7.2
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 180 RKAIARVYIVYHQKMKVNLRNHYK-NKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIR 356
+K + Y+ QK ++ R K NK+ K L + +K + K K + + K RK+++
Sbjct: 118 KKKQKKQYLEKKQKKQLKKRKKKKKNKQNKQLTKKLRKQKMKNKKXKKQKKQRKQRKQLK 177
Query: 357 KK 362
KK
Sbjct: 178 KK 179
>UniRef50_Q4Y885 Cluster: Putative uncharacterized protein; n=7;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 1729
Score = 31.1 bits (67), Expect = 9.6
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +3
Query: 201 YIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRK 347
Y++ ++ +K+ +R K+ K L + KK + M+K K+ +K+KT+K
Sbjct: 288 YLMKNKILKMKIRRKEIEKEKKLLRDQKKKKKNMKKKNGKNSSKVKTKK 336
>UniRef50_A6RMP4 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 881
Score = 31.1 bits (67), Expect = 9.6
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 156 NCPRSXVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMR-KALTKHEAK 332
+ PR V +++ Y+ V R + ++ +PLDL A + R K L + ++
Sbjct: 554 SAPRITSVAESVVDPYLYLKPDTVVRPRERSEQRRIEPLDLSADRAERQREKQLREERSR 613
Query: 333 IKTRKEIRKK 362
+ R+E R++
Sbjct: 614 ERVREERRRE 623
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,531,432
Number of Sequences: 1657284
Number of extensions: 4507148
Number of successful extensions: 13157
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13114
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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