Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_F02
         (477 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1261 - 35826513-35828941,35829201-35829294                       28   3.4  
08_01_0264 - 2142856-2143152,2143667-2143829,2143915-2143992,214...    28   4.5  
07_03_1501 - 27005542-27005976,27006657-27008660                       28   4.5  
01_01_0538 - 3938389-3939727,3939828-3940203,3940299-3940516,394...    28   4.5  
02_05_0740 - 31404004-31404180,31404365-31405261,31405351-314059...    27   7.8  

>01_06_1261 - 35826513-35828941,35829201-35829294
          Length = 840

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 22/60 (36%), Positives = 33/60 (55%)
 Frame = +3

Query: 207 KAYYESLSKMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLE 386
           K  +ES S+  +V  LAG  + E+  KVISLE         I+ ++N    LQ R+++LE
Sbjct: 313 KQKFESSSEASAVH-LAGQVD-EIVDKVISLEIAASSQNAQINRMKNEADELQKRLDSLE 370


>08_01_0264 -
           2142856-2143152,2143667-2143829,2143915-2143992,
           2144097-2144162,2144941-2145098
          Length = 253

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 294 SLENENKDLKKAIDDLRNLVISLQVRVETLE 386
           SLE++ K+LK   D+LR+    L+V  ETLE
Sbjct: 146 SLEDKIKELKAEKDELRDEKQKLKVEKETLE 176


>07_03_1501 - 27005542-27005976,27006657-27008660
          Length = 812

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 10/38 (26%), Positives = 24/38 (63%)
 Frame = +3

Query: 255 AGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQV 368
           AGVP+T+++ +++ +  E++  +  +  +R  VI L +
Sbjct: 707 AGVPDTDIAGRLVEILKEHRTPRVKVPRMRRFVIELAI 744


>01_01_0538 -
           3938389-3939727,3939828-3940203,3940299-3940516,
           3940607-3940769,3940866-3941100,3941186-3941353
          Length = 832

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 270 TELSTKVISLENENKDLKKAIDDLRNLVISLQVRVE 377
           TEL  +   L+ +N++ + AI D+  L+I  + RVE
Sbjct: 326 TELENEATELKQKNEEERVAIQDMEALLIKRRRRVE 361


>02_05_0740 -
           31404004-31404180,31404365-31405261,31405351-31405978,
           31405997-31406468,31406575-31407052
          Length = 883

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 15/59 (25%), Positives = 29/59 (49%)
 Frame = +3

Query: 204 EKAYYESLSKMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 380
           EKA+   + +   VA        ++  +V  LE +NK+LK A  +    + +L++  E+
Sbjct: 612 EKAFERKIIEYQDVARQRAESEDKMKEQVEVLEKKNKELKLACKNQSEKISALELENES 670


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,019,606
Number of Sequences: 37544
Number of extensions: 165741
Number of successful extensions: 373
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)